FC931608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL4_USTMA (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Ustilago maydis GN=CYP6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 53/178 (29.78%), Postives = 79/178 (44.38%), Query Frame = 3 Query: 90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHV------------FEDEIKP-ELKHTGAGILSMANAGPNTN---------------GSQFFITL-TPASHLDGKHTIFGRVCRGME---VIKRLGSVQTDKDDRPIHDVKI 527 V LETS+G ++L+ + +PR+C NF +L + YY + F R+ KDF+ Q SI+ + F E +LKH G +S A + GSQFF+TL +LDG+H FG V G E + ++ TD RP+ D++I Sbjct: 3 VLLETSLGDIVIDLHTELAPRSCTNFLKLCSKHYYKLNAFFRVEKDFLAQTGDPSNTGKGGASIWSQLPSTSQDSSTSTYFTPESSDGQLKHLKKGTVSFACFRKHVQGADEDGEGGSCELLAGSQFFVTLKDELDYLDGRHAPFGMVVEGHEPGGTLDKINHAFTDDQKRPLRDIRI 180
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_ACIAD (Peptidyl-prolyl cis-trans isomerase OS=Acinetobacter sp. (strain ADP1) GN=rotA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 42/161 (26.09%), Postives = 79/161 (49.07%), Query Frame = 3 Query: 90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTP-----ASHLDGKHTIFGRVCRGMEVIKRLGSVQTD----KDDRPIHDVKILRTSVK 545 V ++T++G+ +ELY +P + +NF + +YN + FHR+I +F++Q + ++E L +T + + P++ SQFFI + AS D + +FG+V +GM+V+ ++ +V T + P VKI+ +K Sbjct: 24 VEMKTNLGNIEIELYNNKAPISAKNFESYVKNNFYNGTIFHRVIPNFMIQGGGFETNMKEKAT--AAPIKNEASNGLANTRGTLAMARTSNPDSATSQFFINVADNNFLNASRTDAGYAVFGKVIKGMDVVDKIANVPTSTYGMHQNVPKQPVKIISVQIK 182
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_SALTY (Peptidyl-prolyl cis-trans isomerase A OS=Salmonella typhimurium GN=ppiA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 3 Query: 30 SVVVLKATIKMLASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDG-----KHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 521 +V L A + G P V L TS G+ +EL + +P + +NF + G+YNN+ FHR+I F++Q ++E L++T I A ++ SQFFI + + LD + +FG+V +GM+V ++ V P HDV Sbjct: 11 AVFALSALSPAALAAKGDPHVLLTTSAGNIELELNSQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFNEQMQQKKP--NPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQV-------PTHDV 170
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_ECOLI (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli (strain K12) GN=ppiA PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 3 Query: 30 SVVVLKATIKMLASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDG-----KHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 521 +V L A + G P V L TS G+ +EL + +P + +NF + G+YNN+ FHR+I F++Q ++E L++T I A ++ SQFFI + + LD + +FG+V +GM+V ++ V P HDV Sbjct: 11 AVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKP--NPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQV-------PTHDV 170
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_ECOL6 (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli O6 GN=ppiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 3 Query: 30 SVVVLKATIKMLASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDG-----KHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 521 +V L A + G P V L TS G+ +EL + +P + +NF + G+YNN+ FHR+I F++Q ++E L++T I A ++ SQFFI + + LD + +FG+V +GM+V ++ V P HDV Sbjct: 11 AVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKP--NPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQV-------PTHDV 170
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_ECO57 (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli O157:H7 GN=ppiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 3 Query: 30 SVVVLKATIKMLASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDG-----KHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 521 +V L A + G P V L TS G+ +EL + +P + +NF + G+YNN+ FHR+I F++Q ++E L++T I A ++ SQFFI + + LD + +FG+V +GM+V ++ V P HDV Sbjct: 11 AVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKP--NPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQV-------PTHDV 170
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIB_MYCLE (Probable peptidyl-prolyl cis-trans isomerase B OS=Mycobacterium leprae GN=ppiB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 47/161 (29.19%), Postives = 78/161 (48.45%), Query Frame = 3 Query: 69 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIK--------PELKHT---GAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRV-CRGMEVIKRL--GSVQTDKDDRP 509 +D ++ T+ G+ + L SP T +FA L+ +G++NN+K HR+ ++ G+ F +E P+LK G L+MAN+GPNTNGSQFF+ S L ++T+FG + G+ + ++ G + + DD P Sbjct: 123 TDPATVSASMATNQGNIGLLLNNAESPCTVNSFASLTGQGFFNNTKCHRLTTSLMLGVLQCGDPKVDGTGGPGYKFANEYPTDQYPPNDPKLKQPVLYPRGTLAMANSGPNTNGSQFFLVYHD-SQLPPEYTVFGTIQADGLATLDKIAKGGIASGGDDGP 282
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CP21C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial OS=Arabidopsis thaliana GN=CYP21-3 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 42/156 (26.92%), Postives = 71/156 (45.51%), Query Frame = 3 Query: 75 DGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 542 D P TL+T GS T+EL+ +P F + + GY+ F R++K F++Q + I LKH ++ A G +FFI L+ K T+FGRV +G +V++ + V+TD +P ++I+ ++ Sbjct: 75 DLPRFATLDTGKGSVTIELFKDTAPNVVDQFMKFCQDGYFKGFLFSRVVKHFVIQAGDSAEFDAVKD---WALDRKNIDTSLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQPKSPIEIMSVTL 226 The following BLAST results are available for this feature:
BLAST of FC931608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931608 ID=FC931608; Name=FC931608; organism=Citrus clementina; type=EST; length=705bpback to top |