FC931608

Overview
NameFC931608
Unique NameFC931608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15358 contig Ccv1_Contig15358:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = 3
Query:   99 ETSMGSFTVELYYKHSPRTCRNFAELSRRGY--------YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 527
            +T  G   +EL+   +P+T  NF +L    +        Y  + FHR+I  F+VQ             SIYG  FEDE   ++KHTG G+LSMAN+GPNTNG QFFIT  PA  LDGKH +FGRV  G+  ++++ +V T  ++RP   V+I
Sbjct:   23 DTPAGRIKMELFDDITPKTAENFRQLCTGEHRINSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDE-NFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENVPTGANNRPKLQVRI 173          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 61/147 (41.50%), Postives = 88/147 (59.86%), Query Frame = 3
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRT 536
            +G  T+ L+ K  P+T  NF  L+   +G+ Y  S FHR+I +F++Q             SIYG  F DE   +L H   G+LSMANAGP++NGSQFFIT      LDG H +FG V  G +++K++   +TD  D+P+ DVKI+++
Sbjct:   40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKS 185          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRT-SVKD 548
            +G   + LY K  P+T  NF  L+   +G+ Y  S FHR+IK F++Q             SIYG  F DE   +L+HT  G+LSMANAG +TNGSQFFIT  P   LDG+H +FG V  G EV++++ +V     D+P   VKI+++  +KD
Sbjct:   49 LGRIVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADE-NFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQIKD 199          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 68/149 (45.64%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  105 SMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDK-DDRPIHDVKILRT 536
            S G   + L+    P+T  NF  LS   +GY Y  S FHRII +F++Q             SIYG  FEDE   +LKH G G+LSMANAGPNTNGSQFFI   P   LD +H +FG V  G++V+K+L S +T K D+ P    KI ++
Sbjct:   94 SAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDE-SFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPKKPCKIAKS 241          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   87 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGP-NTNGSQFFITLTPASHLDGKHTIFGRVC-RGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 542
            +V ++T+ G   VEL+ K  P+  RNF  L+  GYY+   FHR++  FI+Q            S YG  FEDEI   LK    G+L MAN G  N+N SQFFITL  A  L  KHT+FG++    +  +  +G++ TDK++RP+   KI R  +
Sbjct:   14 KVIIDTTAGEIEVELWGKECPKAVRNFLALTMEGYYDGVIFHRVVPGFIIQSGDPTGTGMGGESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIVGNTIFNVLNIGNLDTDKEERPLIPPKIRRIHI 167          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24
Identity = 60/161 (37.27%), Postives = 86/161 (53.42%), Query Frame = 3
Query:   90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHV-------FEDEIKPELKHTGAGILSMANAGPNTNGSQFFITL-TPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 548
            V LET++G   ++LY +  PR C NF +L +  YYN    H + +DFI+Q            SI+G +       FE E  P +KH   G +SM N G + +GSQF IT      +LDG HT+FG V  GM+++K++     DKD  P  D++I  T + D
Sbjct:    3 VLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKINETFVDKDFVPYQDIRINHTVILD 163          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24
Identity = 70/184 (38.04%), Postives = 95/184 (51.63%), Query Frame = 3
Query:   84 PEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITL-----------------TPAS----------HLDGKHTIFGRVC--RGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 548
            P+VT++T+ G  T+ L+  H+P+T  NF  L++ GYY+   FHRII +F++Q            SIYG  FEDE   EL +   G LSMANAGPNTNGSQFFI                   TP +          HLD +HT+FG++      +V+  +  V+T   D+P  DV I    V D
Sbjct:  288 PKVTIKTNHGDMTLVLFPDHAPKTVANFLGLAKEGYYDGIIFHRIIPEFMIQGGDPTGTGMGGQSIYGESFEDEFSDEL-YNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKPKEDVIIETIEVFD 470          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24
Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 3
Query:  108 MGSFTVELYYKHSPRTCRNFAELSRRGY---YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 527
            +G   + L+ K  P+T  NF EL+++     Y  SKFHR+I DF++Q             SIYG  F DE   +LKH GAG LSMANAG +TNGSQFFIT      LDG+H +FG++  GM+V++++   +    DRP  DV I
Sbjct:   42 IGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADE-NFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVII 184          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24
Identity = 69/179 (38.55%), Postives = 99/179 (55.31%), Query Frame = 3
Query:   30 SVVVLKATIKMLASDDGPPEVTL---------ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 527
            +++V   T + ++++   P +T          E S+G     LY K  P+T  NF +L+  + GY Y  S FHR+I  F++Q             SIYG  F DE   +L+HT  G+LSMANAGP++NGSQFFIT    S LDGKH +FG+V  GM+V+ ++    T+   +P  DV I
Sbjct:   12 TLLVTLCTFRFVSAESKGPVITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYGYKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDE-NFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVI 189          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24
Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 3
Query:  111 GSFTVELYYKHSPRTCRNFAEL----------SRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 533
            G   +EL+    P+T  NF  L           ++  Y  S FHR+I  F++Q             SIYG  F DE     KHT  G+LSMANAGP TNGSQFFIT     HLDGKH +FG+V  GM+V++++ + QTD+ D+P+ +VKI +
Sbjct:   16 GRIIMELF-PDVPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIH-KHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKIAK 165          
The following BLAST results are available for this feature:
BLAST of FC931608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIH_CRYNE7.935e-2542.11Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
PPIB_SCHPO7.935e-2541.50Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB_ASPFU7.935e-2542.76Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYPB_VICFA7.935e-2545.64Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
CWC27_CRYNE7.935e-2540.26Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]
PPIL4_MOUSE1.036e-2437.27Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
BPPI_STRP61.036e-2438.04Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
CYP5_CAEEL1.768e-2443.75Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIB2_RHIOR3.015e-2438.55Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPX_USEUD3.015e-2442.11Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]

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Properties
Property NameValue
Genbank descriptionC34107A08EF PostHarvP1 Citrus clementina cDNA clone C34107A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931608 ID=FC931608; Name=FC931608; organism=Citrus clementina; type=EST; length=705bp
GATCGTTGTTTCGTTTCTGAGTTTCTGATAGTGTTGTGGTCTTGAAAGCA
ACAATAAAGATGCTGGCAAGTGACGACGGTCCGCCGGAGGTCACTTTAGA
AACTTCCATGGGCTCTTTCACCGTCGAGCTTTACTACAAGCACTCTCCAA
GAACTTGCAGGAACTTTGCTGAACTATCTCGCAGAGGTTATTATAATAAC
AGCAAATTCCACAGAATTATTAAGGATTTTATAGTTCAAGGTGGAGATCC
TACCGGGACTGGAAGGGGAGGAGATTCCATATATGGCCATGTTTTCGAAG
ATGAAATAAAACCAGAATTAAAGCATACTGGAGCTGGGATCTTGTCCATG
GCAAATGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATCACTTTGAC
GCCTGCTTCACATCTGGATGGAAAGCACACTATATTTGGAAGAGTATGCA
GAGGAATGGAAGTGATCAAAAGGCTTGGCAGTGTCCAAACTGATAAAGAT
GACAGGCCCATCCATGACGTGAAGATACTACGGACTTCTGTTAAGGACTG
ATGCCATGAAACGGTTATGGAAACCAACGTTTCCACATGATTTTGGGTGC
ACTAGAGCCAGTGTTCAAAAATCTGATTCTGAAAATTTCTAACGTCTGAT
TTTGGATGCACTGTACTTTGGTATTTTATTGAACAGAAGGCAAATATGGA
TCATT
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