FC931614

Overview
NameFC931614
Unique NameFC931614
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length419
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig789 contig Ccv1_Contig789:372..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 9.257e-62
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDI+LWKFETTKYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P YS+ RYDEIVKEVS+Y+KK+GYNP  VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVP 192
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 1.579e-61
Identity = 113/138 (81.88%), Postives = 125/138 (90.58%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS+ARY+EI KEVSSY+KK+GYNP  V FVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVP 192
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 7.837e-61
Identity = 112/138 (81.16%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD++ P YS+ARY+EI KEVSSY+KK+GYNP  V FVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVP 192
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_HELZE (Elongation factor 1-alpha (Fragment) OS=Heliothis zea PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_HELVI (Elongation factor 1-alpha (Fragment) OS=Heliothis virescens PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.746e-60
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVP
Sbjct:   41 KYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 178
The following BLAST results are available for this feature:
BLAST of FC931614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A2_BOVIN9.257e-6281.16Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A2_DROME1.579e-6181.88Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A1_DROME7.837e-6181.16Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A_SPOFR1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Spodoptera... [more]
EF1A_HELZE1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELVI1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELGL1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL1.746e-6080.43Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]

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Properties
Property NameValue
Genbank descriptionC34107B02EF PostHarvP1 Citrus clementina cDNA clone C34107B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931614 ID=FC931614; Name=FC931614; organism=Citrus clementina; type=EST; length=419bp
ATTCAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGG
TATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACT
GCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATT
ACCGGTACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCAC
CGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATG
CTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAAC
AAGATGGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACGATGAAAT
TGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGA
AAGTCCCATTCGTGCCCAT
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