FC931614

Overview
NameFC931614
Unique NameFC931614
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length419
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_CANAL (Elongation factor 1-alpha OS=Candida albicans GN=TEF1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 8.110e-58
Identity = 108/138 (78.26%), Postives = 122/138 (88.41%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY+ TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD+   K+ K R++EI+KE S+++KKVGYNP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDSV--KWDKNRFEEIIKETSNFVKKVGYNPKTVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_SORMA (Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.059e-57
Identity = 108/138 (78.26%), Postives = 122/138 (88.41%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  ++S+AR++EI+KE  +++KKVGYNP  V FVP
Sbjct:   56 KYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--QWSQARFEEIIKETKNFIKKVGYNPATVAFVP 191
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.059e-57
Identity = 109/138 (78.99%), Postives = 121/138 (87.68%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLG +Q+I   NKMD T  K+S+ RY+EIVKEVS ++KK+G+NP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGFRQLIVAINKMDTT--KWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.059e-57
Identity = 110/138 (79.71%), Postives = 122/138 (88.41%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCAVLII   TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T   +S+AR++EIVKE S+++KKVG+NP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.059e-57
Identity = 109/138 (78.99%), Postives = 121/138 (87.68%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLG +Q+I   NKMD T  K+S+ RY+EIVKEVS ++KK+G+NP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGFRQLIVAINKMDTT--KWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.383e-57
Identity = 108/138 (78.26%), Postives = 122/138 (88.41%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD  T  +++ARY EI+KE S+++KKVG+NP+ V FVP
Sbjct:   56 KYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMD--TANWAEARYQEIIKETSNFIKKVGFNPKAVAFVP 191
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.383e-57
Identity = 108/138 (78.26%), Postives = 121/138 (87.68%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY+ TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD+   K+ ++RY EIVKE S+++KKVGYNP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDSV--KWDESRYQEIVKETSNFIKKVGYNPKTVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.383e-57
Identity = 109/138 (78.99%), Postives = 122/138 (88.41%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T   +S+AR++EIVKE S+++KKVG+NP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 1.807e-57
Identity = 108/138 (78.26%), Postives = 121/138 (87.68%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKF+T KYY TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLAFTLGVKQ+I   NKMD+   K+S+ RY+EI KE ++++KKVGYNP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFQTPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVKQLIVAINKMDSV--KWSQDRYNEICKETANFVKKVGYNPKSVPFVP 190
[Close]
BLAST of FC931614 vs. ExPASy Swiss-Prot
Match: EF1A_PICGU (Elongation factor 1-alpha OS=Pichia guilliermondii GN=TEF1 PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 1.807e-57
Identity = 107/138 (77.54%), Postives = 122/138 (88.41%), Query Frame = 1 
Query:    4 QYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP 417
            +YAWVLDKLKAERERGITIDIALWKFET KY+ TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLA+TLGV+Q+I   NKMD+   K+ K R++EI+KE S+++KKVGYNP+ VPFVP
Sbjct:   55 KYAWVLDKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAYTLGVRQLIVAVNKMDSV--KWDKNRFEEIIKETSNFVKKVGYNPKTVPFVP 190
The following BLAST results are available for this feature:
BLAST of FC931614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_CANAL8.110e-5878.26Elongation factor 1-alpha OS=Candida albicans GN=T... [more]
EF1A_SORMA1.059e-5778.26Elongation factor 1-alpha OS=Sordaria macrospora G... [more]
EF1A2_RHIRA1.059e-5778.99Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A1_SCHPO1.059e-5779.71Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A1_RHIRA1.059e-5778.99Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_TRIRE1.383e-5778.26Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_ASHGO1.383e-5778.26Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1A2_SCHPO1.383e-5778.99Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A_YARLI1.807e-5778.26Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1A_PICGU1.807e-5777.54Elongation factor 1-alpha OS=Pichia guilliermondii... [more]

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Properties
Property NameValue
Genbank descriptionC34107B02EF PostHarvP1 Citrus clementina cDNA clone C34107B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931614 ID=FC931614; Name=FC931614; organism=Citrus clementina; type=EST; length=419bp
ATTCAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGG
TATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACT
GCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATT
ACCGGTACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCAC
CGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATG
CTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAAC
AAGATGGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACGATGAAAT
TGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGA
AAGTCCCATTCGTGCCCAT
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