FC931620

Overview
NameFC931620
Unique NameFC931620
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27
Identity = 78/198 (39.39%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  106 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYIC-SRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +   +C ++ +  AA    +  +   +E  +   + + GP++VAI+A     Q Y  GV     C S  L+H V  VGYG         K   +WII+
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIK 295          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 67/197 (34.01%), Postives = 103/197 (52.28%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +  GGL  + DYPY   +     +  +      +  +  +  +++      V + P+   +++     Q Y  GV     C   L+HGV  VGYG+          + YWI++
Sbjct:  144 LPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGV-FDGTCGTNLNHGVVVVGYGTE-------NGRDYWIVK 323          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 76/217 (35.02%), Postives = 112/217 (51.61%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRL--PKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYG 633
            D++  E  +   GL+  L     K++   P + + D    +P  FDWR++ +V  VK Q  CGSCW+FS    +E    +     + LSEQQLVDCD           ++GCNGGLM+ AFE  ++AGG+  E  YPYTG D    CK + ++       ++     E ++   L + GP++VAI+ V +  Y  GV+        L+HGV  VGYG
Sbjct:   93 DISSNELLQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVD--GVCK-NTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVLLVGYG 297          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 80/231 (34.63%), Postives = 110/231 (47.62%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF-DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC-SRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D+T  EFR   L      R   +  +   L     P   DWR KG V PV++QG CGSCW+ ST  A+E  + + +G  V LS QQLVDC            + GCNGG   + FEY +K  GL  + DYPY+G +    CK  DKS+    +  +  V+  E  +   +   GP++  +    M++Y GG+     C    L HGV  VGYG           + YWII+
Sbjct:   77 DITDEEFR-DMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYG-------NHGCNGGFAVNGFEY-VKDNGLESDADYPYSGKE--DKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIE-------NGQKYWIIK 289          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 76/198 (38.38%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  106 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  +  G+  E+ YPY G D   +C ++ +  AA    +  +   +E  +   + + GP++VAI+A     Q Y  GV     CS   ++H V  VGYG         K   +WII+
Sbjct:  116 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQ-------KGNKHWIIK 295          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 78/232 (33.62%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D T  EFR++   +     +   + Q  +  +  LP   DWR++G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            ++GC  G  + AF Y LK  GL  E  YPY G D    C++     +A++  F  +  +E  +   +   GP++ AI+A +   + Y GGV     CS   ++H V  VGYG  G          YW+I+
Sbjct:   82 DTTGEEFRKSLSDILIPAAVTNPSAQKQV--SIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDC-------SKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD--GPCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVLVVGYGFEGN---ETDGNNYWLIK 299          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26
Identity = 77/244 (31.56%), Postives = 117/244 (47.95%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICS-RRLDHGVFFVGYGS----------AGYAPIRLKEKPYWIIQ 687
            DLT  EF + Y   R   R P    +       + +P   DWR+ K  +  VK+QGSC  CW+ +    ++    +   + V +S Q+L+DC+          C +GCNGG +  A+   L   GL  E+DYP+ G  + H C   K K  A + +F+++S +E  IA  L  +GP+ V IN   +Q Y  GV  + P  C  R++DH V  VG+G             ++  R    PYWI++
Sbjct:   91 DLTEEEFGQLYGQERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILK 325          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26
Identity = 69/194 (35.57%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  106 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYW 678
            P   DWR+KGAV PVK+Q  CGSCW+FST   +EG N + TGKL+SLSEQ+L+DCD             GC GG    + +Y    GG+  E++YPY    +G     +K      +  +  V  +++      + N P++V   +     Q Y GG+ + P  C  + DH V  +GYG A     +L +K  W
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR---------SHGCKGGYQTGSIQYVADNGGVHTEKEYPYE-KKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNGP--CGYKNDHAVTAIGYGKA-----QLLDKNSW 178          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 71/195 (36.41%), Postives = 107/195 (54.87%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP   DWR+K  V PVK+Q  CGSCW+FST   +E    +   K ++LSEQ LV+CD         + ++GC GGLM+ A E  L+ GG++  E+ PY G D    CK    +++ S +   V+  +E+++   LV NGP++VAI+   +  Y  G++     +  L+H V  VGYG          + PYWI++
Sbjct:  124 LPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFD--GVCKKSPFELSISGSRRYVLQ-NENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNEGLNHAVLLVGYGVK-------NDVPYWILK 299          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 73/231 (31.60%), Postives = 110/231 (47.62%), Query Frame = 1
Query:    4 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL--DEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            L P EF+  YLG +        A+    +P   LP  FDWR+K  V PV++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  +  +    L+ +  YP+   + G    F +S+   SV +FS  +    ED++A  L+  GPL V ++A+  Q Y+GG+   +  S   +H V   G+   G         PYW+++
Sbjct:   66 LFPEEFKALYLGSKYAWAPRYPAEGQRPIPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVN-GQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGIIQHHCSSGEANHAVLITGFDRTG-------NTPYWMVR 279          
The following BLAST results are available for this feature:
BLAST of FC931620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CATK_MACFA2.139e-2739.39Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CPR4_ARATH3.648e-2734.01Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATV_GVXN8.127e-2735.02Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATLL_PHACE8.127e-2734.63Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATK_RABIT8.127e-2738.38Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATJ_RAT1.061e-2633.62Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATW_MOUSE2.365e-2631.56Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
MEX2_JACME4.033e-2635.57Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATV_GVCP5.268e-2636.41Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATO_MOUSE5.268e-2631.60Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34107B09EF PostHarvP1 Citrus clementina cDNA clone C34107B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931620 ID=FC931620; Name=FC931620; organism=Citrus clementina; type=EST; length=689bp
GACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAA
GCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATG
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTTTTCGTGGGATACGGTTCAGCTGGCTATGCTCC
AATCAGGTTGAAGGAGAAGCCATACTGGATCATCCAGAA
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