FC931620

Overview
NameFC931620
Unique NameFC931620
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26
Identity = 79/217 (36.41%), Postives = 107/217 (49.31%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAG 642
            DL+  EF   Y+G      + +  D+  I   T +LP + DWR+KGAV PV+ QGSCGSCW+FS    +EG N + TGKLV LSEQ+LVDC+             GC GG    A EY  K G  +R + YPY         K     I  +     V   +E  +  N +   P++V + +     Q Y GG+     C  ++DH V  VGYG +G
Sbjct:   98 DLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAKNGIHLRSK-YPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNL-LNAIAKQPVSVVVESKGRPFQLYKGGI-FEGPCGTKVDHAVTAVGYGKSG 302          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26
Identity = 67/218 (30.73%), Postives = 112/218 (51.38%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAP 651
            DL+  E    Y GL   ++         I  P    P +FDWR++  V  +K+Q +CG+CW+F+T  ++E    +     + LSEQQ++DCD+          D GC+GGL+++AFE  ++ G L++E +YPY G ++    + D++ +      +  V   E+++   L   GP+ +AI+A  +  Y  G+   Y  +  L+H V  VGYG     P
Sbjct:   81 DLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVNYHHGI-IHYCENYGLNHAVLLVGYGVENNVP 288          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26
Identity = 68/200 (34.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query:   91 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            P +  P +FDWR+   V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GG+  E DYPY  T  G  C+ + ++    V +    + + E+++   L   GP+ VAI+A  +  Y  G+      +  L+H V  VGY             PYWI++
Sbjct:  109 PPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQ-CRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGI-MRQCANHGLNHAVLLVGYAVE-------NNIPYWILK 289          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26
Identity = 69/197 (35.03%), Postives = 96/197 (48.73%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP   DWR +G V  V+ QG C SCW+F  TGA+EG  F  TGKL+ LS Q L+DC            + GC  G   +AF+Y L  GGL  E  YPY   +    C+++    +A +  F V+   ED +   +   GP+A  ++ +    + Y  GV     CS  ++H V  VGYG  G          YW+I+
Sbjct:  125 LPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKP-------QGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE--GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGN---ETDGNNYWLIK 309          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26
Identity = 83/241 (34.44%), Postives = 118/241 (48.96%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---------LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            DLT  EF      +R  LRLP   D      T++         LP   DWR KGAV PV++QG CGSC++F+T  ALE  +   TG+L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT++   C++ +S    +   F+ +   DE  +   + K GP+ V I+      + Y  GV     C R  DH V  VGYG+            YWI++
Sbjct:  144 DLTDEEFM-----VRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTEQ--RCRWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP-DHAVLAVGYGT------HPSYGDYWIVK 362          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25
Identity = 77/224 (34.38%), Postives = 108/224 (48.21%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRL-DHGVFFVGYGS 636
            DLT  EF + Y G RR       A   P +        P   +P   DWR+   A+ P+KDQ +C  CW+ +  G +E    ++    V +S Q+L+DC         G C  GC+GG +  AF   L   GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN   +Q Y  GV  + P  C  +L DH V  VG+GS
Sbjct:   93 DLTEEEFGQLY-GYRRA------AGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGS 300          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 83/221 (37.56%), Postives = 107/221 (48.42%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIR 657
            D++  EF  TYL LR       +A  A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   K   LSEQ LVDC    D E       GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F+   +D     A  ++   ++VA++A   Q Y  GV     C++ L+HGV  VG  + G   IR
Sbjct:   78 DMSQQEFASTYLSLRVPKTAKLNASNANFQYKG---AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFT--DIDSCDELAQAIQERTVSVAVDANPWQFYRSGVLSK--CTKNLNHGVVLVGVQADGAWKIR 281          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 74/235 (31.49%), Postives = 113/235 (48.09%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D+T  EF   Y GL     LP +  + P++  +D+     P   DWR+ GAV  VK+QG CGSCW+F++   +E    +  G LVSLSEQQ++DC          +   GC GG +N A+ + +   G+     YPY        CK +    +A +  ++ V  + ++     V N P+A A++A    Q Y  GV     C  RL+H +  +GYG           K +WI++
Sbjct:   88 DMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK--GTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDASGNFQHYKRGVFTG-PCGTRLNHAIVIIGYGQDS------SGKKFWIVR 299          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 80/238 (33.61%), Postives = 113/238 (47.48%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPI------LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSA---GYAPIRLKEKPYW 678
            DL+  EF+  Y+G      LP+D    P           DLP   DWR KGAV PVK QG C SCW+FST   +EG N + TG LV LSEQ+LVDCD +           GCN G  +++ +Y  + G  +R + YPY    +   C+ ++             V  + +    N + + P++V + +     Q Y GG+     C  ++DH V  VGYG +   GY  I+    P W
Sbjct:   98 DLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQNGIHLRAK-YPYIA--KQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGI-FEGSCGTKVDHAVTAVGYGKSGGKGYILIKNSWGPGW 317          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 74/231 (32.03%), Postives = 109/231 (47.19%), Query Frame = 1
Query:    4 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV--VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            L P EF+  YL  +        A+    +P   LP  FDWR+K  V  V++Q  CG CW+FS  GA+E A  +    L  LS QQ++DC +          + GCNGG   +A  +  K    L+++ +YP+     G    F  S    S+  +S    S  ED++A  L+  GPL V ++AV  Q Y+GG+   +  S   +H V   G+   G         PYWI++
Sbjct:   75 LFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFK-AQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHHCSSGEANHAVLITGFDKTG-------STPYWIVR 288          
The following BLAST results are available for this feature:
BLAST of FC931620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
PAPA3_CARPA6.880e-2636.41Caricain OS=Carica papaya PE=1 SV=2[more]
CATV_NPVBS6.880e-2630.73Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATV_NPVOP8.986e-2634.00Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATQ_RAT8.986e-2635.03Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATL_BRUPA8.986e-2634.44Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATW_HUMAN2.002e-2534.38Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATL2_PARTE3.414e-2537.56Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
ANAN_ANACO3.414e-2531.49Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
PAPA4_CARPA4.459e-2533.61Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATO_HUMAN4.459e-2532.03Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34107B09EF PostHarvP1 Citrus clementina cDNA clone C34107B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931620 ID=FC931620; Name=FC931620; organism=Citrus clementina; type=EST; length=689bp
GACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAA
GCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATG
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTTTTCGTGGGATACGGTTCAGCTGGCTATGCTCC
AATCAGGTTGAAGGAGAAGCCATACTGGATCATCCAGAA
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