FC931620

Overview
NameFC931620
Unique NameFC931620
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1
Query:  517 GPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            GPLAVAINA YMQTYIGGVSCPYICSRRL+HGV  VGYGSAGYAPIRLKEKPYW+I+
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGYAPIRLKEKPYWVIK 57          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 67/193 (34.72%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  106 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYW 678
            P   DWREKGAV PVK+Q  CGSCW+FST   +EG N + TG+L+SLSEQ+L+DC++            GC+GG    + +Y +   G+  E +YPY    +G     DK      +  +  V  +++      + N P++V  ++     Q Y GG+     C    DH V  VGYG   Y  ++    P W
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVVD-NGVHTEREYPYE-KKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGI-YEGPCGTNTDHAVTAVGYGKT-YLLLKNSWGPNW 181          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 79/245 (32.24%), Postives = 111/245 (45.31%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRL-DHGVFFVGY-----------GSAGYAPIRLKEKPYWIIQ 687
            DLT  EF R Y   R     PK   +       + +P   DWR+  G +  VK Q SC  CW+ +  G +E    +   + V LS Q+L+DC         G C  GC GG +  AF   L   GL  E+DYP+ G  + H C   K    A + +F ++  +E +IA  L   GP+ V IN   ++ Y  GV  + P  C   L DH V  VG+           G+AG  P   +  P+WI++
Sbjct:   93 DLTEEEFGRLYGHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC---------GRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILK 328          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24
Identity = 73/232 (31.47%), Postives = 113/232 (48.71%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ--TYIGGVSCPYICSR-RLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D+T  EFR+  + +   +   K         + +LP   +W+++G V PV+ QG C SCW+FS TGA+EG  F  TG+L+ LS Q LVDC            + GC  G    A  Y ++ GGL  E  YPY   ++  +C++      A++  F  V  +ED +   +   GP++VAI+A +     Y  G+     CS   + H +  VGYG  G        + YW+++
Sbjct:   82 DMTLEEFRKVMIEI--PVPTVKKGKSVQKRLSVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRP-------QGNWGCYLGNTYLALHYVMENGGLESEATYPY--EEKDGSCRYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGR---ESDGRKYWLVK 299          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 78/235 (33.19%), Postives = 111/235 (47.23%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPK---DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK-FDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVFFVGYGSA---GYAPIRLKEKPYW 678
            DL+  EF++ Y+G   +        D +        + P   DWR KGAV PVK+QG+CGSCW+FST   +EG N + TG L+ LSEQ+LVDCD             GC GG   ++ +Y     G+   + YPY    + + C+  DK      +  +  V  + +      + N PL+V + A     Q Y  GV     C  +LDH V  VGYG++    Y  I+    P W
Sbjct:   98 DLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVAN-NGVHTSKVYPYQA--KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGV-FDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNW 319          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 82/222 (36.94%), Postives = 109/222 (49.10%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIR 657
            D++  EF +TYL L+    +P+ A   A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   +   LSEQ LVDC    D       + GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F    +D     A  ++   +AVA++A   Q Y  GV     C++ L+HGV  VG  + G   IR
Sbjct:   78 DMSQQEFAQTYLSLK----VPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFK--DIDSCDELAQTIQERTVAVAVDANPWQFYRSGVLSK--CTKNLNHGVVLVGVQADGAWKIR 281          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 82/233 (35.19%), Postives = 112/233 (48.07%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGV--SCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D+T  EF +T+LG+  ++       +A +      P   DWR    + P KDQG CGSCW+F TT  LEG      GKL S SEQQLVDCD         + D+GC GG  +++ ++  +  GL  E DYPY        CK  K+ +A    +  V    E  +   + +NGP+AV ++A     Q Y  G   S     SR ++H V  VGYGS            YWII+
Sbjct:   62 DMTHEEFIQTHLGMTYEVPETTSNVKAAVKAA---PESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD---------ASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAV--AGTCKKVKN-VATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSN-------SNGKYWIIR 270          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 63/188 (33.51%), Postives = 95/188 (50.53%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVFFVGYGSAGYAPIR 657
            +P   DWR+ GAV  VK+QG CG CW+F+    +EG   +  G LV LSEQ+++DC          +   GC GG +N A+++ +   G+  +E+YPY        C  +    +A +  +S V  +++      V N P+A  I+A     Q Y GGV S P  C   L+H +  +GYG   Y  +R
Sbjct:    2 VPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQ--GTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGP--CGFSLNHAITIIGYGRDSYWIVR 175          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 73/215 (33.95%), Postives = 99/215 (46.05%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYG 633
            D++  EF+  Y G         +     +L   D  +P   DWR+KGAV PVK+QGSCGSCW+FS    +EG   + TG L   SEQ+L+DCD             GCNGG   SA +   +  G+     YPY G  R +    +K   AA       V    +      + N P++V + A     Q Y GG+     C  ++DH V  VGYG
Sbjct:   98 DMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQR-YCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVG-PCGNKVDHAVAAVGYG 300          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 74/223 (33.18%), Postives = 110/223 (49.33%), Query Frame = 1
Query:   25 RTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN-AVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            +TYL  L++ L   +D D A +   N      DWR   +V  VKDQ +CG CW+FST G++EG       K   LS Q+L+DCD         S  +GC GGL+ SA+EY  K  GL+  +D P+   D+   C   K+K   SV ++ V    E  +    + + P +V ++ +  +  Y  GV     C + L+H V  VG G        + +K YW++Q
Sbjct:  207 KTYLKNLKKALNTDEDVDLAKLTGEN-----LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKY-GLVSAKDLPF--VDKARRCSVPKAK-KVSVPSYHVFKGKE--VMTRSLTSSPCSVYLSVSPELAKYKSGVFTGE-CGKSLNHAVVLVGEGYD-----EVTKKRYWVVQ 403          
The following BLAST results are available for this feature:
BLAST of FC931620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
PAPA5_CARPA5.824e-2589.47Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
MEX1_JACME5.824e-2534.72Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATW_FELCA9.935e-2532.24Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATM_MOUSE1.298e-2431.47Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
PAPA2_CARPA1.695e-2433.19Chymopapain OS=Carica papaya PE=1 SV=2[more]
CATL1_PARTE2.891e-2436.94Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
ACP1_ENTHI2.891e-2435.19Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
MDO1_PSEMR4.174e-2333.51Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
PAPA1_CARPA5.451e-2333.95Papain OS=Carica papaya PE=1 SV=1[more]
CYSP_THEPA4.615e-2233.18Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]

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Properties
Property NameValue
Genbank descriptionC34107B09EF PostHarvP1 Citrus clementina cDNA clone C34107B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931620 ID=FC931620; Name=FC931620; organism=Citrus clementina; type=EST; length=689bp
GACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAA
GCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATG
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTTTTCGTGGGATACGGTTCAGCTGGCTATGCTCC
AATCAGGTTGAAGGAGAAGCCATACTGGATCATCCAGAA
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