FC931620

Overview
NameFC931620
Unique NameFC931620
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30
Identity = 79/232 (34.05%), Postives = 115/232 (49.57%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            DLT  EFR TYLG        K +++        LP+  DWR  GAV  +K QG CG CW+FS    +EG N + TG L+SLSEQ+L+DC    +         GCNGG +   F++ +  GG+  EE+YPYT  D    C  D +++   ++  +  V  + +      V   P++VA++A     + Y  G+     C   +DH V  VGYG+ G          YWI++
Sbjct:   93 DLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD--GECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTG-PCGTAIDHAVTIVGYGTEGGI-------DYWIVK 307          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30
Identity = 73/203 (35.96%), Postives = 112/203 (55.17%), Query Frame = 1
Query:   91 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            P +  P  FDWRE+  V  +K+QG+CG+CW+F+T  ++E    +   +L+ LSEQQL+DCD         S D GCNGGL+++AFE  ++ GG+  E DYP+ G  R   C  D+ +  + + V  +  V ++E+++   L   GP+ +AI+A  +  Y  GV  SC    +  L+H V  VGYG            PYW+ +
Sbjct:  140 PPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVG--RNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWVFK 321          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30
Identity = 86/202 (42.57%), Postives = 105/202 (51.98%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRRLD---HGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP   DWRE G V PVK+Q  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC         G  + GCNGGL + AFEY    GG+  EE YPY G +    C +     A  V    N ++ + DE + A  LV+  P++VA   +   + Y  GV     C    D   H V  VGYG            PYW+I+
Sbjct:  144 LPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN--GVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGV-------PYWLIK 327          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 73/197 (37.06%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP+  DWR KGAV  +K+Q  CGSCW+FS   A+E  N + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+Y +  GG+  +++YPY+      +CK  + ++  S+  F  V+ + +    + V + P++V + A     Q Y  G+     C    +HGV  VGYG+          K YWI++
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ--GSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTG-PCGTAQNHGVVIVGYGTQ-------SGKNYWIVR 177          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.340e-29
Identity = 76/202 (37.62%), Postives = 107/202 (52.97%), Query Frame = 1
Query:   91 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            P   LP  +DWR+   V P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D GCNGGLM+ AF+  L  GG+  E DYPY G+++   C  D  KIA  + + F     DE+++   +   GP+A+A++A+ +  Y  G+   C       L+H V  +G+G            PYWII+
Sbjct:  152 PDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQ--MCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQCHIY---DLNHAVLLIGWGIE-------NNVPYWIIK 332          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.340e-29
Identity = 78/231 (33.77%), Postives = 119/231 (51.52%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            DL+  E    Y GL   L      +   +  P    P +FDWR    +  VK+QG CG+CW+F+T  +LE    +A  +L++LSEQQ++DCD         S D GC GGL+++AFE  +  GG+  E DYPY  ++  + C+ D +K    V   +  +++ E+++   L   GP+ VAI+A  +  Y  G+   Y  +  L+H V  VGYG            PYWI++
Sbjct:   77 DLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSN--NYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGI-IKYCANNGLNHAVLLVGYGVE-------NNVPYWILK 288          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29
Identity = 77/199 (38.69%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D   +C ++ +  AA    +  + + +E  +   + + GP++V+I+A     Q Y  GV     C R  ++H V  VGYG+        K   YWII+
Sbjct:  115 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD--ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGNKYWIIK 295          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29
Identity = 79/233 (33.91%), Postives = 115/233 (49.36%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA---VYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            DLT  EFR TYL         K +++        LP+  DWR  GAV  +K QG CG CW+FS    +EG N + TG L+SLSEQ+L+DC    +         GCNGG +   F++ +  GG+  EE+YPYT  D    C  D +++   ++  +  V  + +      V   P++VA++A    + Q   G  + P  C   +DH V  VGYG+ G          YWI++
Sbjct:   93 DLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD--GECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGP--CGTAVDHAVTIVGYGTEGGI-------DYWIVK 307          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29
Identity = 88/234 (37.61%), Postives = 118/234 (50.43%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV-KNGPLAVAINAVY--MQTYIGGVSCPYICS-RRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D+T  E  RT  GLR     P+      +   ++  PA  DWR KG V PVKDQG CGSCW+FS+ GALEG     TGKL+SLS Q LV C          S ++GC GG M +AFEY     G+  E+ YPY G D   +C +  +  AA    +  +  D ++     V + GP++V I+A     Q Y  GV     C+   ++H V  VGYG+        K   +WII+
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQD--ESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQ-------KGTKHWIIK 300          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28
Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = 1
Query:   91 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAP 651
            P    P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY   +    C+ + +K    V + +  + + E+++   L   GP+ +AI+A  +  Y  G+   Y     L+H V  VGYG     P
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN--CRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVENNIP 283          
The following BLAST results are available for this feature:
BLAST of FC931620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
ACTN_ACTDE4.604e-3034.05Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATV_NPVLD6.013e-3035.96Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
ALEU_HORVU6.013e-3042.57Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
ERVB_TABDI7.853e-3037.06Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATV_NPVHZ1.340e-2937.62Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATV_NPVEP1.340e-2933.77Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATK_RAT3.898e-2938.69Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
ACTN_ACTCH3.898e-2933.91Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATK_CHICK5.090e-2937.61Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATV_NPVBM1.481e-2836.17Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]

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Properties
Property NameValue
Genbank descriptionC34107B09EF PostHarvP1 Citrus clementina cDNA clone C34107B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931620 ID=FC931620; Name=FC931620; organism=Citrus clementina; type=EST; length=689bp
GACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAA
GCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATG
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTTTTCGTGGGATACGGTTCAGCTGGCTATGCTCC
AATCAGGTTGAAGGAGAAGCCATACTGGATCATCCAGAA
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