FC931620

Overview
NameFC931620
Unique NameFC931620
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11876 contig Ccv1_Contig11876:426..1115. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28
Identity = 76/199 (38.19%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D   +C ++ +  AA    +  + + +E  +   + + GP++V+I+A     Q Y  GV     C R  ++H V  VGYG+        K   +WII+
Sbjct:  115 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD--ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGSKHWIIK 295          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 78/232 (33.62%), Postives = 118/232 (50.86%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL----------PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDE-------DQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR--RLDHGVFFVGYGSA 639
            D+TP EF + YL      + PKD  Q   +    +          PA +DWR+KG +  VK QG CG  W+FS TGA+E A+ +ATG LVSLSEQ+LVDC  E +         G   G    +FE+ L+ GG+  ++DYPY   +    CK +K +   ++  +  + + +       +Q   + +   P++V+I+A     Y GG+     C+    ++H V  VGYGSA
Sbjct:   97 DITPQEFSKKYL------QAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESE---------GSYNGWQYQSFEWVLEHGGIATDDDYPYRAKE--GRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGGIYDGENCTSPYGINHFVLLVGYGSA 311          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 80/198 (40.40%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  106 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYIC-SRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D    C ++ +  AA    +  +   +E  +   + + GP++VAI+A     Q Y  GV     C S  L+H V  VGYG         K K +WII+
Sbjct:  117 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDEN--CMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIK 296          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 78/236 (33.05%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-VYMQTYIGGV-SCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            D+T +EF   Y G+     LP + ++ P++  +D+     P   DWR+ GAV  VK+Q  CGSCWSF+    +EG   + TG LVSLSEQ+++DC          +   GC GG +N A+++ +   G+  EE+YPY        C  +    +A +  +S V  ++++     V N P+A  I+A    Q Y GGV S P  C   L+H +  +GYG             YWI++
Sbjct:   88 DMTKSEFVAQYTGVS----LPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC----------AVSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQ--GTCNANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGP--CGTSLNHAITIIGYGQDS------SGTKYWIVR 299          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 75/231 (32.47%), Postives = 118/231 (51.08%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            DL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE  +  GG+  E DYPY   +    C+ + +K    V   +  +++ E+++   L   GP+ VAI+A  +  Y  G+   Y  +  L+H V  VGY             P+WI++
Sbjct:   78 DLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGD--CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGI-MKYCANHGLNHAVLLVGYAVENGV-------PFWILK 289          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 67/188 (35.64%), Postives = 104/188 (55.32%), Query Frame = 1
Query:   91 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAP 651
            P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY   +    C+ + +K    V + +  +++ E+++   L   GP+ +AI+A  +  Y  G+   Y  +  L+H V  VGYG     P
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN--CRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVENNIP 283          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28
Identity = 67/188 (35.64%), Postives = 104/188 (55.32%), Query Frame = 1
Query:   91 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAP 651
            P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY   +    C+ + +K    V + +  +++ E+++   L   GP+ +AI+A  +  Y  G+   Y  +  L+H V  VGYG     P
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN--CRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVENNIP 283          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28
Identity = 75/198 (37.88%), Postives = 100/198 (50.51%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP   DWR+KG V PV+ QG C +CW+F+ TGA+E      TGKL  LS Q LVDC            ++GC GG   +AF+Y L  GGL  E  YPY G D    C+++     A +  F  +   ED + A +   GP+   I+A +   + Y GG+   P   S  + HGV  VGYG  G   I      YW+I+
Sbjct:  115 LPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD--GPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKG---IETDGNHYWLIK 300          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28
Identity = 68/197 (34.52%), Postives = 105/197 (53.30%), Query Frame = 1
Query:  103 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +K GGL  + DYPY   +     +  ++     +  +  +  +++      V + P+   I++     Q Y  GV     C   L+HGV  VGYG+          + YW+++
Sbjct:  137 LPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV-FDGSCGTNLNHGVVVVGYGTE-------NGRDYWLVK 316          
BLAST of FC931620 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28
Identity = 78/231 (33.77%), Postives = 118/231 (51.08%), Query Frame = 1
Query:    1 DLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVFFVGYGSAGYAPIRLKEKPYWIIQ 687
            DL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG+CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY   +    C+ + +K    V   +  V + E+++   L   GPL VAI+A  +  Y  GV   Y  +  L+H V  VGY             P+WI++
Sbjct:   78 DLSKDETISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGD--CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGV-IRYCANHGLNHAVLLVGYAVENGV-------PFWILK 289          
The following BLAST results are available for this feature:
BLAST of FC931620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CATK_MOUSE1.481e-2838.19Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
P34_SOYBN2.526e-2833.62P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATK_PIG2.526e-2840.40Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
BROM1_ANACO2.526e-2833.05Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVCF3.300e-2832.47Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAC3.300e-2835.64Viral cathepsin OS=Autographa californica nuclear ... [more]
CATV_NPVRO4.309e-2835.64Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATR_MOUSE4.309e-2837.88Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CPR3_ARATH5.628e-2834.52Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATV_NPVCD5.628e-2833.77Viral cathepsin OS=Choristoneura fumiferana defect... [more]

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Properties
Property NameValue
Genbank descriptionC34107B09EF PostHarvP1 Citrus clementina cDNA clone C34107B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931620 ID=FC931620; Name=FC931620; organism=Citrus clementina; type=EST; length=689bp
GACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAA
GCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATG
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTTTTCGTGGGATACGGTTCAGCTGGCTATGCTCC
AATCAGGTTGAAGGAGAAGCCATACTGGATCATCCAGAA
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