FC931621

Overview
NameFC931621
Unique NameFC931621
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_SALRD (Gamma-glutamyl phosphate reductase OS=Salinibacter ruber (strain DSM 13855) GN=proA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.252e-13
Identity = 34/106 (32.08%), Postives = 62/106 (58.49%), Query Frame = 1
Query:  328 MAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +A   + ++R L  L ++ + + L  +ADALEA+E  I   N  DV+AA+E G   +L+ RL L P +I+ +A ++R +A   +P+G++   T+   G+ + K  +
Sbjct:   24 LAADCKAAARELSTLSTETKNRTLRRMADALEADEEAILAANGKDVSAAREEGLDDALIDRLVLNPDRITKMADALRDVASFADPVGEMGGTTKRPSGIEVGKMRI 129          

HSP 2 Score: 25.7942 bits (55), Expect = 5.252e-13
Identity = 10/27 (37.04%), Postives = 17/27 (62.96%), Query Frame = 3
Query:  630 GETSCPLGVLLIVFESRPDALVQIASL 710
            G+   PLGV+ +++E+RP+     A L
Sbjct:  125 GKMRIPLGVIGMIYEARPNVTADAAGL 151          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_SYNPX (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH8102) GN=proA PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 5.252e-13
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 1
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEK 636
            + A A R ++  L     Q R   L  +ADAL     +I   N  D+  +   G A +L++RL L  GK+      +R LA + +P+G+     EL  GL+LE+
Sbjct:   13 QRAGAVRLAAVDLGQTDDQQRADALQAMADALAERAEVIVAANREDLERSAAEGLAPALMARLKLDAGKLRGAIDGVRKLASLPDPLGRRQLHRELDQGLVLER 116          

HSP 2 Score: 39.6614 bits (91), Expect = 5.252e-13
Identity = 18/25 (72.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query:  639 SCPLGVLLIVFESRPDALVQIASLA 713
            S PLGV+ ++FE+RPDA+VQIASLA
Sbjct:  118 SVPLGVVGVIFEARPDAVVQIASLA 142          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_AGRT5 (Gamma-glutamyl phosphate reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=proA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.254e-13
Identity = 34/99 (34.34%), Postives = 60/99 (60.61%), Query Frame = 1
Query:  340 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEK 636
            A+ +SR L    +  + + LL +A A+EA++  I   N  D+AAA+ AG A S V RL L   +I+ +A+ IR +A + +P+G+++   +  +GL +E+
Sbjct:   23 AKAASRPLSIAGTDQKNRALLAMASAIEASKEAILAANRKDLAAAESAGLAASFVDRLTLNDARIAGIAEGIRSVAALADPVGEVIAAWDRPNGLKIER 121          

HSP 2 Score: 25.0238 bits (53), Expect = 5.254e-13
Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++ESRP+      +L
Sbjct:  125 PLGVIGVIYESRPNVTADAGAL 146          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_HAES2 (Gamma-glutamyl phosphate reductase OS=Haemophilus somnus (strain 2336) GN=proA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.258e-13
Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  322 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +EM   A++++  L  L  Q +   L  +A+ LE     I VEN  D+  A+E G + +++ RL L   +I+S+AK +R +  + +PIGQI+    L  G  LE+  V
Sbjct:    4 KEMGKNAKQAATILAQLSQQQKNTALQIIAEQLELQSDKILVENAKDIQLAKENGLSDAIIDRLLLTKERINSIAKDVRHIISLSDPIGQIIDGGILESGTKLERVRV 111          

HSP 2 Score: 28.4906 bits (62), Expect = 5.258e-13
Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +A+L
Sbjct:  112 PLGVIGVIYEARPNVTVDVATL 133          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ERWT9 (Gamma-glutamyl phosphate reductase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=proA PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.258e-13
Identity = 31/107 (28.97%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M  AA+ +S +L  L + ++ ++L+ +AD LEA  + I   N+ D+A A++ G + +L+ RL L   ++  +A  +R +  + +P+G ++   +L  GL +E+  V
Sbjct:    4 QMGQAAKAASYQLSVLSTAEKNQLLMTIADRLEAQSAEILAANQQDLADARQNGMSAALLDRLMLDRQRLKGIADDVRQVCRLADPVGVVIDGGKLDSGLRIERRRV 110          

HSP 2 Score: 29.261 bits (64), Expect = 5.258e-13
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVVGVIYEARPNVTVDVASL 132          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_HAEPS (Gamma-glutamyl phosphate reductase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=proA PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 5.258e-13
Identity = 32/107 (29.91%), Postives = 59/107 (55.14%), Query Frame = 1
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            ++A  A+++S  L    +  + + L  +ADALE     I V N  D+  A+  G +++++ RL L P +I  +A  +R +A + +P+GQ++    L  GL +E+  V
Sbjct:    5 KIAQQAKQASFELAQFGNVQKNQALFSIADALEQRTEEILVVNAKDIDYAKSQGISEAIIDRLLLTPERIRGIANDVRNVASLADPVGQVIDGGVLDSGLKIERQRV 111          

HSP 2 Score: 30.8018 bits (68), Expect = 5.258e-13
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+L ++E+RP+  + +ASL
Sbjct:  112 PLGVILTIYEARPNVTIDVASL 133          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_STRTD (Gamma-glutamyl phosphate reductase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=proA PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.829e-13
Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 1
Query:  340 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            A+ +SR++  L +  +  +L  VA AL A    I  EN  D+A A E G +K +  RL L   +I+ +A+ +R +AD+++PIGQ+++     DGL + +  V
Sbjct:   11 AKVASRQIAKLSTAAKNDLLNQVAKALVAESDYIITENAKDIANASENGISKIMQDRLLLTEDRIAGIAEGVRQVADLQDPIGQVVRGYTNLDGLKIVQKRV 112          

HSP 2 Score: 28.4906 bits (62), Expect = 6.829e-13
Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASLA 713
            P+GV+ ++FESRP+  +   SLA
Sbjct:  113 PMGVIAMIFESRPNVSIDAFSLA 135          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ANASP (Gamma-glutamyl phosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=proA PE=3 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 8.859e-13
Identity = 32/104 (30.77%), Postives = 54/104 (51.92%), Query Frame = 1
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEK 636
            ++A   R+++  L  L ++ + + +  VA ALE+ +  I   N  D  AA   G AK L  RL L   K+      +R +  + +PIGQ+  + EL  GL+L++
Sbjct:   12 DIAQQTRQAASLLAMLSTEAKNQAIAAVAQALESAKEEILQANIDDCEAATAEGIAKPLYKRLQLDEHKLRDAIAGVRDVGKLADPIGQVQIQRELDTGLVLKR 115          

HSP 2 Score: 39.2762 bits (90), Expect = 8.859e-13
Identity = 17/25 (68.00%), Postives = 22/25 (88.00%), Query Frame = 3
Query:  639 SCPLGVLLIVFESRPDALVQIASLA 713
            +CPLGVL I+FE+RP+A +QI SLA
Sbjct:  117 TCPLGVLGIIFEARPEAAIQIISLA 141          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ROSS1 (Gamma-glutamyl phosphate reductase OS=Roseiflexus sp. (strain RS-1) GN=proA PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 8.866e-13
Identity = 36/116 (31.03%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  304 VKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADAL--EANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            ++++GAR     AR + RR+  + ++ +   L  +A AL  EAN + +   N  DVAA ++AG + +L+ R+ L P +++++A   R +A + +P+G+    T L +GL + K  V
Sbjct:    4 IEEIGAR-----ARAAGRRMALMPTERKNAALEAIATALIDEANAAEVLAANAIDVAAGRDAGLSPALIDRMTLTPQRLAAIAADTRAVARLPDPVGERFDATVLENGLRVHKRRV 114          

HSP 2 Score: 28.1054 bits (61), Expect = 8.866e-13
Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +A+L
Sbjct:  115 PLGVVGVIYEARPNVTVDVAAL 136          
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_SPHWW (Gamma-glutamyl phosphate reductase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=proA PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.151e-12
Identity = 33/107 (30.84%), Postives = 58/107 (54.21%), Query Frame = 1
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M   AR ++ RL    + D+ K L++ A A+ A  + I   N  DVA AQ  G   +++ RL L P ++  +A  +  +A + +P+GQ +  T   +GL+L++  V
Sbjct:   22 DMGARARAAAVRLAGAPTADKAKALVEAAKAIRARAAAILAANAEDVARAQANGLTAAMIDRLTLDPARLEGVAAGLEAVAALPDPVGQRIDETRRPNGLLLQRVRV 128          

HSP 2 Score: 25.7942 bits (55), Expect = 1.151e-12
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  645 PLGVLLIVFESRPDALVQIASLA 713
            PLGV+ I++ESRP+      +L+
Sbjct:  129 PLGVIGIIYESRPNVTADAGALS 151          
The following BLAST results are available for this feature:
BLAST of FC931621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
PROA_SALRD5.252e-1332.08Gamma-glutamyl phosphate reductase OS=Salinibacter... [more]
PROA_SYNPX5.252e-1331.73Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_AGRT55.254e-1334.34Gamma-glutamyl phosphate reductase OS=Agrobacteriu... [more]
PROA_HAES25.258e-1333.33Gamma-glutamyl phosphate reductase OS=Haemophilus ... [more]
PROA_ERWT95.258e-1328.97Gamma-glutamyl phosphate reductase OS=Erwinia tasm... [more]
PROA_HAEPS5.258e-1329.91Gamma-glutamyl phosphate reductase OS=Haemophilus ... [more]
PROA_STRTD6.829e-1334.31Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_ANASP8.859e-1330.77Gamma-glutamyl phosphate reductase OS=Anabaena sp.... [more]
PROA_ROSS18.866e-1331.03Gamma-glutamyl phosphate reductase OS=Roseiflexus ... [more]
PROA_SPHWW1.151e-1230.84Gamma-glutamyl phosphate reductase OS=Sphingomonas... [more]

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Properties
Property NameValue
Genbank descriptionC34107B10EF PostHarvP1 Citrus clementina cDNA clone C34107B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931621 ID=FC931621; Name=FC931621; organism=Citrus clementina; type=EST; length=715bp
CTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCTATAG
TGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATAAGAG
CAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGGAAGA
GGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCGCCGG
TATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCATAAAGG
TACTTGAAGGAAAGCGTGTTGGGACTCTCTTTCATAGAGATGCACATTTG
TGGGTAAAACAAGTTGGGGCCCGTGAGATGGCAGTTGCAGCACGAGAAAG
TTCTAGACGGCTTCAGGCTCTACAATCTCAAGATAGGAGGAAAATTTTGC
TCGACGTAGCTGATGCCTTAGAGGCAAATGAAAGCTTGATTAAGGTTGAG
AATGAAGCCGATGTAGCTGCTGCACAGGAAGCTGGATATGCGAAATCACT
AGTATCACGTTTGGCACTGAAGCCTGGGAAGATCTCTAGCCTTGCAAAAT
CTATTCGTATACTTGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAG
AGAACAGAGCTTGCGGATGGACTCATCCTGGAGAAACATCATGTCCTTTG
GGCGTCCTCTTGATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGAT
AGCTTCATTGGCCAT
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