FC931621

Overview
NameFC931621
Unique NameFC931621
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ECO57 (Gamma-glutamyl phosphate reductase OS=Escherichia coli O157:H7 GN=proA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.282e-17
Identity = 36/107 (33.64%), Postives = 67/107 (62.62%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+++S +L  L S+++ ++L  +AD LEA   +I   N  DVA A+  G +++++ RLAL P ++  +A  +R + ++ +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 9.282e-17
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_CITK8 (Gamma-glutamyl phosphate reductase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=proA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.282e-17
Identity = 37/107 (34.58%), Postives = 67/107 (62.62%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+ +S +L  L S+++ ++L  +AD LEA    I   N  DVA A+E G +++++ RLAL P ++ ++A  +R + ++ +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKAASYKLALLSSREKNRVLEKIADELEAQTESILSANAQDVAEARENGLSEAMLDRLALTPARLKAIADDVRQVCNLADPVGQVIDGGLLDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 9.282e-17
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_PROM0 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=proA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.205e-16
Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            E A   R +S ++   ++ DR K L  +AD LE N   I   N AD ++A++ G +++L+SRL L   K++S  + +R + ++ +P+ QI  + EL++GLILE+  V
Sbjct:   16 EKADKVRLASIKISQTENIDRIKALNFMADCLEKNSKEILEANSADYSSAEKKGISRALLSRLKLSKAKLNSGIEGVRKVGELADPVNQIQIKRELSNGLILERKTV 122

HSP 2 Score: 37.7354 bits (86), Expect = 1.205e-16
Identity = 16/23 (69.57%), Postives = 22/23 (95.65%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASLA 713
            P+GVL ++FESRPDA++QI+SLA
Sbjct:  123 PIGVLGVIFESRPDAVMQISSLA 145
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_PROM2 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9215) GN=proA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.567e-16
Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            E A   R +S ++   ++++R K L  +AD LE N   I   N AD ++A++ G +K+L+SRL L   K+++  + +R + D+ +P+ Q+  + EL+ GLILE+  V
Sbjct:   16 EKAEKVRLASIKISQTENKNRIKALNFMADYLEKNSKEILEANNADYSSAEKKGISKALLSRLKLSRAKLNAGIEGVRKVGDLADPVNQVQIKKELSKGLILERKTV 122

HSP 2 Score: 38.1206 bits (87), Expect = 1.567e-16
Identity = 17/23 (73.91%), Postives = 22/23 (95.65%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASLA 713
            P+GVL I+FESRPDA++QI+SLA
Sbjct:  123 PIGVLGIIFESRPDAVMQISSLA 145
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_SHIDS (Gamma-glutamyl phosphate reductase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=proA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.568e-16
Identity = 36/107 (33.64%), Postives = 66/107 (61.68%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+++S +L  L S+++ ++L  +AD LEA   +I   N  DVA A+  G  ++++ RLAL P ++  +A  +R + ++ +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLGEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGILDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 1.568e-16
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_SYNS3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9311) GN=proA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.036e-16
Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 1 
Query:  328 MAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEK 636
            +A A R ++  L    +Q R++ L+ +A +LEA+   I   N  D+A A   G A +LV+RL L  GK++     +R L+ +++P+G      ELADGL+LE+
Sbjct:   16 LATAVRRAAVVLGQSSNQQRQQALMAMAASLEAHADRIVAANAEDLAQASADGLAPALVARLKLDAGKLAGAIDGVRQLSSLQDPLGARQLHRELADGLVLER 118

HSP 2 Score: 38.1206 bits (87), Expect = 2.036e-16
Identity = 16/23 (69.57%), Postives = 22/23 (95.65%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASLA 713
            PLGVL ++FE+RPDA++QIA+LA
Sbjct:  122 PLGVLGVIFEARPDAVIQIAALA 144
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_SALAR (Gamma-glutamyl phosphate reductase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=proA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.039e-16
Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+ +S +L  L S+++ ++L  +AD LE+    I   N  DVA A+E G + +++ RLAL P ++ S+A  +R +  + +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKAASYKLALLSSREKNRVLEKIADELESQTETILSANAQDVAQARENGLSDAMLDRLALTPARLKSIADDVRQVCHLTDPVGQVIDGGLLDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 2.039e-16
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ECOUT (Gamma-glutamyl phosphate reductase OS=Escherichia coli (strain UTI89 / UPEC) GN=proA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.650e-16
Identity = 36/107 (33.64%), Postives = 66/107 (61.68%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+++S +L  L S+++ ++L  +AD LEA    I   N  DVA A+  G +++++ RLAL P ++  +A  +R + ++ +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSESILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 2.650e-16
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ECOL6 (Gamma-glutamyl phosphate reductase OS=Escherichia coli O6 GN=proA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.650e-16
Identity = 36/107 (33.64%), Postives = 66/107 (61.68%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+++S +L  L S+++ ++L  +AD LEA    I   N  DVA A+  G +++++ RLAL P ++  +A  +R + ++ +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSESILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 2.650e-16
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
[Close]
BLAST of FC931621 vs. ExPASy Swiss-Prot
Match: PROA_ECOK1 (Gamma-glutamyl phosphate reductase OS=Escherichia coli O1:K1 / APEC GN=proA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.650e-16
Identity = 36/107 (33.64%), Postives = 66/107 (61.68%), Query Frame = 1 
Query:  325 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKHHV 645
            +M +AA+++S +L  L S+++ ++L  +AD LEA    I   N  DVA A+  G +++++ RLAL P ++  +A  +R + ++ +P+GQ++    L  GL LE+  V
Sbjct:    4 QMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSESILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRV 110

HSP 2 Score: 29.6462 bits (65), Expect = 2.650e-16
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 3 
Query:  645 PLGVLLIVFESRPDALVQIASL 710
            PLGV+ +++E+RP+  V +ASL
Sbjct:  111 PLGVIGVIYEARPNVTVDVASL 132
The following BLAST results are available for this feature:
BLAST of FC931621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
PROA_ECO579.282e-1733.64Gamma-glutamyl phosphate reductase OS=Escherichia ... [more]
PROA_CITK89.282e-1734.58Gamma-glutamyl phosphate reductase OS=Citrobacter ... [more]
PROA_PROM01.205e-1635.51Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM21.567e-1634.58Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SHIDS1.568e-1633.64Gamma-glutamyl phosphate reductase OS=Shigella dys... [more]
PROA_SYNS32.036e-1635.92Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SALAR2.039e-1634.58Gamma-glutamyl phosphate reductase OS=Salmonella a... [more]
PROA_ECOUT2.650e-1633.64Gamma-glutamyl phosphate reductase OS=Escherichia ... [more]
PROA_ECOL62.650e-1633.64Gamma-glutamyl phosphate reductase OS=Escherichia ... [more]
PROA_ECOK12.650e-1633.64Gamma-glutamyl phosphate reductase OS=Escherichia ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34107B10EF PostHarvP1 Citrus clementina cDNA clone C34107B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931621 ID=FC931621; Name=FC931621; organism=Citrus clementina; type=EST; length=715bp
CTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCTATAG
TGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATAAGAG
CAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGGAAGA
GGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCGCCGG
TATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCATAAAGG
TACTTGAAGGAAAGCGTGTTGGGACTCTCTTTCATAGAGATGCACATTTG
TGGGTAAAACAAGTTGGGGCCCGTGAGATGGCAGTTGCAGCACGAGAAAG
TTCTAGACGGCTTCAGGCTCTACAATCTCAAGATAGGAGGAAAATTTTGC
TCGACGTAGCTGATGCCTTAGAGGCAAATGAAAGCTTGATTAAGGTTGAG
AATGAAGCCGATGTAGCTGCTGCACAGGAAGCTGGATATGCGAAATCACT
AGTATCACGTTTGGCACTGAAGCCTGGGAAGATCTCTAGCCTTGCAAAAT
CTATTCGTATACTTGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAG
AGAACAGAGCTTGCGGATGGACTCATCCTGGAGAAACATCATGTCCTTTG
GGCGTCCTCTTGATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGAT
AGCTTCATTGGCCAT
back to top