FC931623

Overview
NameFC931623
Unique NameFC931623
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.918e-86
Identity = 153/238 (64.29%), Postives = 191/238 (80.25%), Query Frame = 2
Query:    5 RSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDA-KNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYTSARFCHP 715
            R+Y LG G+NF DG VEVLAATQ PGEA   WF+GTADA R+ IWV ED  KNK++E++LILSGD LYRMDY E +QKH+D  ADIT+SC P+ + RAS+YGL+K D SG+++QF+E+PKG DL+ M+ DT+ L  ++ D  K+PYIASMGVY+F+ DVLLNLL+S Y   +DFGSEI+P ++ DHNVQA++F DYWEDIGTI+SFF AN AL EQP KFEFYDPKTPF+TS R+  P
Sbjct:  137 RTY-LGGGINFTDGSVEVLAATQMPGEAAG-WFRGTADAWRKIIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVVQFSEQPKGDDLEAMKVDTSFLNFAIDDPAKYPYIASMGVYVFKRDVLLNLLKSRYAELHDFGSEILPRALHDHNVQAYVFTDYWEDIGTIRSFFDANRALCEQPPKFEFYDPKTPFFTSPRYLPP 372          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.770e-83
Identity = 153/239 (64.02%), Postives = 190/239 (79.50%), Query Frame = 2
Query:    5 RSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDA-KNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDA-VKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYTSARFCHP 715
            R+Y LG G+NF DG VEVLAATQ PGEA   WFQGTADAVR+FIWV ED  K+K +E++LILSGD LYRMDY E +QKH+D  ADIT+SC P+ + RASDYGL+K D SG++IQF+EKPKG  L+ M+ DT+ L  +      ++PYIASMGVY+F+ DVLL+LL+S Y   +DFGSEI+P ++ +HNVQA++F DYWEDIGTI+SFF AN+AL EQP KFEFYDPKTPF+TS R+  P
Sbjct:  153 RTY-LGGGINFTDGSVEVLAATQMPGEAAG-WFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGRVIQFSEKPKGAALEEMKVDTSFLNFATCTLPAEYPYIASMGVYVFKRDVLLDLLKSRYAELHDFGSEILPKALHEHNVQAYVFTDYWEDIGTIRSFFDANMALCEQPPKFEFYDPKTPFFTSPRYLPP 389          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.331e-80
Identity = 141/238 (59.24%), Postives = 186/238 (78.15%), Query Frame = 2
Query:    5 RSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDA-KNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYTSARFCHP 715
            R+Y L  G+NF DG V+VLAATQ P E    WFQGTAD++R+FIWV ED   +K+++N++ILSGD LYRM+Y E +QKH++  ADIT+SC P+D+ RAS  GL+KID +G+++QF EKPKG DL  M+ +T  L  ++ DA K+PY+ASMG+Y+F+ D LL+LL+S Y   +DFGSEI+P +V DH+VQA +F  YWED+GTIKSFF ANLALTEQP+KF+FYDPKTPF+T+ R   P
Sbjct:  150 RTY-LEGGINFADGSVQVLAATQMPEEPAG-WFQGTADSIRKFIWVLEDYYSHKSIDNIVILSGDQLYRMNYMELVQKHVEDDADITISCAPVDESRASKNGLVKIDHTGRVLQFFEKPKGADLNSMRVETNFLSYAIDDAQKYPYLASMGIYVFKKDALLDLLKSKYTQLHDFGSEILPRAVLDHSVQACIFTGYWEDVGTIKSFFDANLALTEQPSKFDFYDPKTPFFTAPRCLPP 385          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.163e-75
Identity = 140/239 (58.58%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 ARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPA-KFEFYDPKTPFYTSARFCHP 715
            +++YNL +G  FG+GFVEVLAA  TP      WFQGTADAVRQ++W+    K  +V+  LILSGDHLYRMDY++F+Q+H DT ADIT+S +P+D+ RASD+GLMK+D SG++++F+EKPKG +L+ MQ DTT+LGL    A   P+IASMG+Y+F+ DVL++LL S +P   DFG E+IPA+   +N QAFLFNDYWEDIGTI SF+ ANLALT+QP+  F FYD + P YT AR+  P
Sbjct:   69 SQTYNLSSG--FGNGFVEVLAAQITP--ENPNWFQGTADAVRQYLWLI---KEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFSEKPKGDELRAMQVDTTILGLDPVAAAAQPFIASMGIYVFKRDVLIDLL-SHHPEQTDFGKEVIPAAATRYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPP 299          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.163e-75
Identity = 140/239 (58.58%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 ARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPA-KFEFYDPKTPFYTSARFCHP 715
            +++YNL +G  FG+GFVEVLAA  TP      WFQGTADAVRQ++W+    K  +V+  LILSGDHLYRMDY++F+Q+H DT ADIT+S +P+D+ RASD+GLMK+D SG++++F+EKPKG +L+ MQ DTT+LGL    A   P+IASMG+Y+F+ DVL++LL S +P   DFG E+IPA+   +N QAFLFNDYWEDIGTI SF+ ANLALT+QP+  F FYD + P YT AR+  P
Sbjct:   69 SQTYNLSSG--FGNGFVEVLAAQITP--ENPNWFQGTADAVRQYLWLI---KEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFSEKPKGDELRAMQVDTTILGLDPVAAAAQPFIASMGIYVFKRDVLIDLL-SHHPEQTDFGKEVIPAAATRYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPP 299          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.562e-74
Identity = 144/239 (60.25%), Postives = 178/239 (74.48%), Query Frame = 2
Query:    2 ARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQP-AKFEFYDPKTPFYTSARFCHP 715
            AR+YN      F +GFVEVLAA QTP      WFQGTADAVRQ++W+ E+    +VE  LILSGDHLYRMDY +F+Q+H DT ADIT+S +P+D+ RASD+GLMKID SG+II F+EKPKG  L  MQ DT++LGL+   A K PYIASMG+Y+F+ +VL  LLR S     DFG EIIP + KD+NVQA+LF+DYWEDIGTI++F++ANLALT+QP   F FYD   P YT AR+  P
Sbjct:   69 ARTYNF---TGFNEGFVEVLAAQQTP--ENPNWFQGTADAVRQYLWLMEEW---DVEEYLILSGDHLYRMDYRQFIQRHRDTGADITLSVIPIDERRASDFGLMKIDDSGRIIDFSEKPKGEALTQMQVDTSVLGLTKEQAQKQPYIASMGIYVFKKEVLFKLLRESVE-RTDFGKEIIPDASKDYNVQAYLFDDYWEDIGTIEAFYHANLALTQQPQPPFSFYDEHAPIYTRARYLPP 298          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.737e-74
Identity = 141/239 (59.00%), Postives = 177/239 (74.06%), Query Frame = 2
Query:    2 ARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQP-AKFEFYDPKTPFYTSARFCHP 715
            AR+YN      F +GFVEVLAA QTP      WFQGTADAVRQ++W+ ++    +V+  LILSGDHLYRMDY  F+Q+H +T ADIT+S +P+DD RASD+GLMKID SG++I F+EKPKG  L  M+ DTT+LGL+   A   PYIASMG+Y+F+ DVL+ LL+ S     DFG EIIP + KDHNVQA+LF+DYWEDIGTI++F+ ANLALT+QP   F FYD + P YT AR+  P
Sbjct:   69 ARTYNFSG---FSEGFVEVLAAQQTP--ENPNWFQGTADAVRQYLWMLQEW---DVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFSEKPKGEALTKMRVDTTVLGLTPEQAASQPYIASMGIYVFKKDVLIKLLKESLE-RTDFGKEIIPDASKDHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPP 298          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.272e-73
Identity = 140/239 (58.58%), Postives = 177/239 (74.06%), Query Frame = 2
Query:    2 ARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQP-AKFEFYDPKTPFYTSARFCHP 715
            AR+YN      F +GFVEVLAA QTP      WFQGTADAVRQ++W+ ++    +V+  LILSGDHLYRMDY  F+Q+H +T ADIT+S +P+DD RASD+GLMKID SG++I F+EKPKG  L  M+ DTT+LGL+   A   PYIASMG+Y+F+ DVL+ LL+ +     DFG EIIP + KDHNVQA+LF+DYWEDIGTI++F+ ANLALT+QP   F FYD + P YT AR+  P
Sbjct:   69 ARTYNFSG---FSEGFVEVLAAQQTP--ENPNWFQGTADAVRQYLWMLQEW---DVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFSEKPKGEALTKMRVDTTVLGLTPEQAASQPYIASMGIYVFKKDVLIKLLKEALE-RTDFGKEIIPDAAKDHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPP 298          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.008e-70
Identity = 135/238 (56.72%), Postives = 175/238 (73.53%), Query Frame = 2
Query:    5 RSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPA-KFEFYDPKTPFYTSARFCHP 715
            R+YN      F DGFVEVLAA QT      KWFQGTADAVRQ++W F++    +++  LILSGDHLYRMDY +F+Q+H +T ADIT+S VP+D+ RAS +GLMKID  G+++ F+EKPKG +LK MQ DTT+LGL+   A + PYIASMG+Y+F+ +VL  LL  + P   DFG EIIP S KD+N+QA+LF  YWEDIGTIK+F+ ANLAL  QP+ +F FY+ + P YT +R+  P
Sbjct:   70 RTYNF---TGFSDGFVEVLAAQQTA--ENPKWFQGTADAVRQYLWAFQEW---DIDEYLILSGDHLYRMDYRDFIQRHRETGADITLSVVPIDEERASSFGLMKIDDHGRVVDFSEKPKGDELKQMQVDTTVLGLTPEQAKESPYIASMGIYVFKKEVLAQLLEEN-PDQTDFGKEIIPFSAKDYNLQAYLFKGYWEDIGTIKAFYEANLALNRQPSPRFSFYNEEYPIYTRSRYLPP 298          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 7.221e-69
Identity = 134/239 (56.07%), Postives = 174/239 (72.80%), Query Frame = 2
Query:    2 ARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPA-KFEFYDPKTPFYTSARFCHP 715
            +R+YN      F +GFVEVLAA QT  +    WFQGTADAVRQ++W+F +    +V+  LILSGDHLYRMDY +F+++H +T ADIT+S VP+DD +A + GLMKID  G+I  F+EKP+G  L+ MQ DT++LGLS   A   PYIASMG+Y+F+ +VL NLL   Y  + DFG EIIP S  DHN+QA+LF+DYWEDIGTI++F+ ANLALT+QP+  F FY+ K P YT  R+  P
Sbjct:   79 SRAYNFSG---FQEGFVEVLAAQQT--KDNPDWFQGTADAVRQYLWLFREW---DVDEYLILSGDHLYRMDYAQFVKRHRETNADITLSVVPVDDRKAPELGLMKIDAQGRITDFSEKPQGEALRAMQVDTSVLGLSAEKAKLNPYIASMGIYVFKKEVLHNLL-EKYEGATDFGKEIIPDSASDHNLQAYLFDDYWEDIGTIEAFYEANLALTKQPSPDFSFYNEKAPIYTRGRYLPP 308          
The following BLAST results are available for this feature:
BLAST of FC931623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
GLGL3_WHEAT2.918e-8664.29Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE1.770e-8364.02Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_MAIZE5.331e-8059.24Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_SYNP65.163e-7558.58Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNE75.163e-7558.58Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_NOSP72.562e-7460.25Glucose-1-phosphate adenylyltransferase OS=Nostoc ... [more]
GLGC_ANAVT9.737e-7459.00Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_ANASP1.272e-7358.58Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_CYAP81.008e-7056.72Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNY37.221e-6956.07Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]

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Properties
Property NameValue
Genbank descriptionC34107C01EF PostHarvP1 Citrus clementina cDNA clone C34107C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931623 ID=FC931623; Name=FC931623; organism=Citrus clementina; type=EST; length=729bp
GGCGCGGTCGTATAATCTTGGAAATGGTGTGAATTTTGGGGATGGGTTTG
TAGAGGTTCTGGCTGCTACTCAAACTCCTGGAGAAGCAGGAAAGAAGTGG
TTCCAAGGGACAGCAGATGCTGTGAGGCAATTTATATGGGTCTTTGAGGA
CGCCAAGAATAAGAATGTGGAGAATGTTTTGATCTTGTCTGGTGATCACC
TTTACCGGATGGACTATACAGAGTTTCTGCAGAAGCATATCGACACAAAA
GCTGATATTACAGTCTCATGTGTACCAATGGATGACTGCCGTGCATCAGA
TTATGGACTAATGAAGATTGACCGCTCAGGGCAAATCATCCAATTTGCTG
AGAAACCTAAGGGCCCTGATCTGAAAGGAATGCAATGTGATACTACTCTT
CTTGGTCTATCTATGCCAGATGCTGTCAAATTTCCTTACATTGCATCAAT
GGGTGTTTACTTGTTTAGAACTGATGTCCTACTAAATCTCTTGAGATCTA
GCTATCCCTTATCCAATGACTTTGGCTCTGAAATTATTCCAGCTTCTGTG
AAGGATCACAATGTCCAAGCCTTTTTATTCAATGACTACTGGGAGGACAT
TGGAACAATAAAGTCCTTTTTTTATGCCAATTTGGCCCTCACAGAACAGC
CTGCGAAGTTTGAATTTTATGATCCCAAGACACCTTTCTATACGTCTGCT
AGATTCTGCCACCCACTAAGTGATCGATG
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