FC931623
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALPA (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASK--SLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALNS (Glucose-1-phosphate adenylyltransferase OS=Salmonella newport (strain SL254) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASK--SLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALHS (Glucose-1-phosphate adenylyltransferase OS=Salmonella heidelberg (strain SL476) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASK--SLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALEP (Glucose-1-phosphate adenylyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASK--SLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALCH (Glucose-1-phosphate adenylyltransferase OS=Salmonella choleraesuis GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASK--ALASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALA4 (Glucose-1-phosphate adenylyltransferase OS=Salmonella agona (strain SL483) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASK--ALASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_HAES2 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus somnus (strain 2336) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 72/227 (31.72%), Postives = 126/227 (55.51%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFYANLALTEQPAKFEFYDPKTP 685
F+++L A Q ++ W++GTADAV Q + + D + + +LIL+GDH+Y+ DY++ L H+ + A TV C+ + +AS++G+M +D + ++ F EKPK P + DT+L ASMG+Y+F D L ++L ++ S+DFG +I+P S+++ + A F+ YW D+GT+ SF+ +N+ L + + + YD + P
Sbjct: 96 FIDMLPARQQIDDS--TWYRGTADAVYQNMAIIRD--HYRPKYILILAGDHIYKQDYSQMLLDHVSSNAKCTVGCIEVPREQASEFGVMAVDENLKVKAFVEKPKDPPAIPNKPDTSL--------------ASMGIYVFDADYLYDVLMREVNTPYTSHDFGKDILPKSLEEEVLYAHPFSRSCMGRNTDGEIYWRDVGTLDSFWQSNIDLVSEHPQLDIYDQRWP 304
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_HAES1 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus somnus (strain 129Pt) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 72/227 (31.72%), Postives = 126/227 (55.51%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFYANLALTEQPAKFEFYDPKTP 685
F+++L A Q ++ W++GTADAV Q + + D + + +LIL+GDH+Y+ DY++ L H+ + A TV C+ + +AS++G+M +D + ++ F EKPK P + DT+L ASMG+Y+F D L ++L ++ S+DFG +I+P S+++ + A F+ YW D+GT+ SF+ +N+ L + + + YD + P
Sbjct: 96 FIDMLPARQQIDDS--TWYRGTADAVYQNMAIIRD--HYRPKYILILAGDHIYKQDYSQMLLDHVSSNAKCTVGCIEVPREQASEFGVMAVDENLKVKAFVEKPKDPPAIPNKPDTSL--------------ASMGIYVFDADYLYDVLMREVNTPYTSHDFGKDILPKSLEEEVLYAHPFSRSCMGRNTDGEIYWRDVGTLDSFWQSNIDLVSEHPQLDIYDQRWP 304
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_DEIDV (Glucose-1-phosphate adenylyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 76/226 (33.63%), Postives = 121/226 (53.54%), Query Frame = 2
Query: 83 EAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKD-HNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYTSARFCHP 715
E G W++GTADAV Q + + + N + + V I SGDH+Y+M+ L+KHI+++AD+T++ PM +A +G+M++D ++ +F EK PD G+ + L + SMG Y+F L LL +S DFG +IP ++ D ++VQA+ F N YW D+GTI +++ AN+ L +F+ Y+P P TS+ F P
Sbjct: 96 ELGAVWYRGTADAVYQNMHLID---NFDADYVAIFSGDHIYKMNVEHMLEKHIESRADVTIAAYPMPRSQAHQFGVMQVDAGWRVTEFLEKV--PDPPGLPENPDL------------SLTSMGNYIFSRRALEELLHTSISGQEDGFDFGHNVIPRALADGYHVQAYDFHRNPIPGQSNPNLYWRDVGTIDAYYEANMDLISINPEFDIYNPSWPLRTSSEFSPP 304
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_CLOCE (Glucose-1-phosphate adenylyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=glgC PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 79/222 (35.59%), Postives = 117/222 (52.70%), Query Frame = 2
Query: 41 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS---NDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
DG V +L+ E G+ WF+GTA+AV Q I + + V+ILSGDH+Y+MDY++ L H + AD T+S + + AS YG+M +G+I +F EKPK P +ASMGVY+F L L S NDFG IIPA + D ++ A+ ++ YW D+GTI++F+ +N+ L + +F +DP+ YT
Sbjct: 82 DGGVTILSP-YLKAEMGE-WFKGTANAVYQNIQYID---KYSPHYVIILSGDHIYKMDYSKMLDFHKENHADATISVINVPYEEASRYGIMNCHENGKIYEFEEKPKNPK---------------------STLASMGVYIFTWSTLREYLIKDNECSDSVNDFGKNIIPAMLGDGKSMWAYQYSGYWRDVGTIQAFWESNMDLVSRVPQFNLFDPEWRIYT 277 The following BLAST results are available for this feature:
BLAST of FC931623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931623 ID=FC931623; Name=FC931623; organism=Citrus clementina; type=EST; length=729bpback to top |