FC931623

Overview
NameFC931623
Unique NameFC931623
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SERP5 (Glucose-1-phosphate adenylyltransferase OS=Serratia proteamaculans (strain 568) GN=glgC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27
Identity = 75/230 (32.61%), Postives = 118/230 (51.30%), Query Frame = 2
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q      + W++GTADAV Q + +    +  + E V+IL+GDH+Y+MDY+  L  H++  A  TV+C+P+    AS++G+M++D +  I++F EKP  P       D +L              ASMG+Y+F  D L  LL    S+   ++DFG ++IP         A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRLST--EHWYKGTADAVYQNLDII---RRYDAEYVVILAGDHIYKMDYSRMLIDHVEKGAQCTVACLPVPRDEASEFGVMEVDENDLILEFLEKPSNPPPMPGNPDMSL--------------ASMGIYIFNADYLFQLLEEDMSTPGSTHDFGKDLIPKITAQKAAWAHPFTLSCVTSNPELPPYWRDVGTLEAYWRANLDLASVTPELDMYDRAWPIRT 308          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPS (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgC PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27
Identity = 76/235 (32.34%), Postives = 121/235 (51.49%), Query Frame = 2
Query:   53 EVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYTSARFCHP 715
            ++L A+Q   +    W++GTADAV Q I + E    K +   ++L+GDH+Y+MDY + LQ+H++  AD+TV C+ +    AS +G+M +D    I  F EKP  P     + D +L+              SMG+Y+F T  L+  L    ++   S+DFG +IIP  VK     A  F+            YW D+GT+ +++ AN+ LT+   + + YD + P +T      P
Sbjct:   93 DILPASQRVSD--DMWYRGTADAVYQNIDIIESYDPKFI---VLLAGDHVYKMDYEKMLQQHVEQGADVTVGCLEVARSEASAFGVMDVDAKDVIRSFLEKPADPPAMPGKPDKSLV--------------SMGIYVFDTKFLIEELHRDAANPDSSHDFGKDIIPYIVKHGKAVAHHFDKSCRRSHAEDTSYWRDVGTVDAYWAANIDLTDIVPQLDLYDREWPIWTYGEITPP 308          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SALAR (Glucose-1-phosphate adenylyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgC PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.069e-27
Identity = 80/231 (34.63%), Postives = 119/231 (51.52%), Query Frame = 2
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    A+ +G+M +D S +II F EKP  P              +MP D  K   +ASMG+Y+F  D L  LL +       S+DFG +IIP   ++    A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--QGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESEKIIDFVEKPANPP-------------AMPGDDSK--ALASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRT 308          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_OCEIH (Glucose-1-phosphate adenylyltransferase OS=Oceanobacillus iheyensis GN=glgC PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.069e-27
Identity = 81/239 (33.89%), Postives = 120/239 (50.21%), Query Frame = 2
Query:   14 NLGNG----VNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQ---FIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFYANL-ALTEQPAKFEFYDPKTPFYT 694
            ++GNG    +N   G V +L      G  G  W+ GTADA+ Q   FI  +E       E VLI+SGDH+Y+MDY + L++H  T AD+T+S + +    A  +G++  +    I +F EKPK P                        +ASMG+Y+F    L   L    +    S DFG +IIP+ + + H + AF FN YW+D+GTI+S++ AN+  L +    F  +D     YT
Sbjct:   67 HIGNGKPWDMNHQHGGVSILPPYT--GTKGGDWYSGTADAIYQNMNFIHQYEP------EYVLIISGDHIYQMDYQQMLEQHKRTNADVTISVIEVPWAEAGRFGILHANDEQIIYEFEEKPKNPSSN---------------------LASMGIYIFNWKTLKKYLIEDANKPNSSRDFGKDIIPSMLNNQHRLYAFKFNGYWKDVGTIQSYWEANMDVLKDNNGYFSLHDRNWRIYT 276          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBCH (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio cholerae GN=glgC2 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.069e-27
Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 2
Query:   89 GKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFGSEIIPASVKDHNVQAFLF---------NDYWEDIGTIKSFFYANLALTEQPAKFEFY 670
            G KW++GTADA+   +W+       + + V++LSGDH+YRMDY   L++HI   A +T++C+ +    AS +G+M ID   +I  F EKP  P     + D +L              ASMG+Y+F  DVL   L     +   S+DFG ++IP  +   +V A+ F         + YW D+GTI SF+ AN+ L +       Y
Sbjct:   93 GGKWYEGTADALFHNMWLLA---RSDAKYVVVLSGDHIYRMDYAAMLEEHISKNATLTIACMQVPRHEASAFGVMAIDDDSRITCFVEKPADPPCIPNRPDHSL--------------ASMGIYIFNMDVLKKALTEDAEIEQSSHDFGKDVIPKLIATGSVFAYSFCSGKGRVARDCYWRDVGTIDSFYDANMDLLQPVPPMNLY 281          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPB (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27
Identity = 77/235 (32.77%), Postives = 119/235 (50.64%), Query Frame = 2
Query:   53 EVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYTSARFCHP 715
            ++L A+Q   E  + W+ GTADAV Q I + E   + + + +++L+GDH+Y+MDY + LQ+H++  AD+TV C+ +    AS +G+M +D    I  F EKP  P               MP       +ASMG+Y+F T  L   LR   +    S+DFG +IIP  VK     A  F+            YW D+GT+ +++ AN+ L +   + + YD   P +T      P
Sbjct:   93 DILPASQRVSE--ELWYLGTADAVYQNIDIIE---SYDPQFIVLLAGDHIYKMDYEQMLQQHVEQGADVTVGCLEVPRREASGFGVMAVDADDVIHSFVEKPANPP-------------PMPGKPTMS-LASMGIYVFDTKFLFEELRRDAADPNSSHDFGKDIIPYIVKHGKAVAHSFDRSCIRSHAEAASYWRDVGTVDAYWAANIDLCDIVPELDLYDHNWPIWTYGEIVPP 308          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_METCA (Glucose-1-phosphate adenylyltransferase OS=Methylococcus capsulatus GN=glgC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27
Identity = 78/228 (34.21%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSC--VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL--RSSYPLSN-DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            F++++ A Q   E+   W+ GTADAV Q + +    + ++ E ++IL+GDH+Y+MDY   L  H++ KAD+T+ C  VP+ D +A  +G+M++D   +I +F EKP  P               MP+       ASMG+Y+F T  L   L   +  P SN DFG +IIP  ++ + V A+ F +       YW D+GT+ S++ AN+ L     +   YD + P +T
Sbjct:   97 FIDIMPAQQRLQES---WYAGTADAVYQNLDII---RQRDPEFIMILAGDHVYKMDYGLMLAYHVERKADLTIGCMEVPLADAKA--FGVMQMDGEQRIRKFVEKPSDPP-------------PMPNRPDHA-AASMGIYIFNTAFLFEQLIKDADTPGSNHDFGMDIIPQVIQKYRVFAYRFRNAQSGVQAYWRDVGTVDSYWAANMELIGVDPELNLYDQEWPIWT 302          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ESCF3 (Glucose-1-phosphate adenylyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glgC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27
Identity = 79/230 (34.35%), Postives = 118/230 (51.30%), Query Frame = 2
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D+  +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL    +    S+DFG +IIP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIQEASAFGVMAVDQDEKIIEFVEKPANPP-------------SMPND-PTRSLASMGIYVFDADYLYELLEEDDNDENSSHDFGKDIIPKITQAGMAYAHPFPLSCVQSDPDSEPYWRDVGTLEAYWKANLDLASVVPELDMYDQHWPIRT 308          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_THEP1 (Glucose-1-phosphate adenylyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgC PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27
Identity = 74/223 (33.18%), Postives = 119/223 (53.36%), Query Frame = 2
Query:   41 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDH--NVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            DG VE+L      G     W++GTA+AV Q +   E+    + E VLILSGDH+Y M+Y + +  H+  +AD T++C+ +    AS +G+M  +  G+I+ F EKP  P                        +AS+G+Y+F  + L  +L    +    S+DFG ++IP  ++++  ++ AF F+ YW D+GT++S++ ANL L      F  YDP   F+T
Sbjct:   80 DGGVEILPPYV--GRHESDWYKGTANAVYQNLEFLEE---NDAELVLILSGDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEEASRFGIMITNVDGKIVDFEEKPAKPRSN---------------------LASLGIYVFNYEFLKKVLIEDENDPNSSHDFGKDVIPRILRENLGSLYAFRFDGYWRDVGTLRSYWEANLELVLPVPPFNLYDPNWRFFT 276          
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_STRMU (Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans GN=glgC PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27
Identity = 75/209 (35.89%), Postives = 116/209 (55.50%), Query Frame = 2
Query:   23 NGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL----RSSYPLSNDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFYANL 634
            +G+N G   ++  +AT+     G +WFQGT+ A+ Q I   +     N E VLILSGDH+Y+MDY + LQ H D  A +TV+ + +    AS +G+M  D + +I++F EKP+                  P + K    ASMG+Y+F  D L  +L    +++  +S DFG  +IPA ++    V  + FN YW+D+GTI+S + AN+
Sbjct:   78 DGINSGATILQPYSATE-----GNRWFQGTSHAIYQNIDYIDSI---NPEYVLILSGDHIYKMDYDDMLQTHKDNMASLTVAVIDVPLKEASRFGIMNTDSNDRIVEFEEKPE-----------------QPKSTK----ASMGIYIFNWDRLRTMLVDAEKNNIDMS-DFGKNVIPAYLESGERVYTYNFNGYWKDVGTIESLWEANM 256          
The following BLAST results are available for this feature:
BLAST of FC931623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
GLGC_SERP52.350e-2732.61Glucose-1-phosphate adenylyltransferase OS=Serrati... [more]
GLGC_RHOPS2.350e-2732.34Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_SALAR3.069e-2734.63Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_OCEIH3.069e-2733.89Glucose-1-phosphate adenylyltransferase OS=Oceanob... [more]
GLGC2_VIBCH3.069e-2734.47Glucose-1-phosphate adenylyltransferase 2 OS=Vibri... [more]
GLGC_RHOPB4.009e-2732.77Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_METCA4.009e-2734.21Glucose-1-phosphate adenylyltransferase OS=Methylo... [more]
GLGC_ESCF34.009e-2734.35Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_THEP15.235e-2733.18Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_STRMU5.235e-2735.89Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionC34107C01EF PostHarvP1 Citrus clementina cDNA clone C34107C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931623 ID=FC931623; Name=FC931623; organism=Citrus clementina; type=EST; length=729bp
GGCGCGGTCGTATAATCTTGGAAATGGTGTGAATTTTGGGGATGGGTTTG
TAGAGGTTCTGGCTGCTACTCAAACTCCTGGAGAAGCAGGAAAGAAGTGG
TTCCAAGGGACAGCAGATGCTGTGAGGCAATTTATATGGGTCTTTGAGGA
CGCCAAGAATAAGAATGTGGAGAATGTTTTGATCTTGTCTGGTGATCACC
TTTACCGGATGGACTATACAGAGTTTCTGCAGAAGCATATCGACACAAAA
GCTGATATTACAGTCTCATGTGTACCAATGGATGACTGCCGTGCATCAGA
TTATGGACTAATGAAGATTGACCGCTCAGGGCAAATCATCCAATTTGCTG
AGAAACCTAAGGGCCCTGATCTGAAAGGAATGCAATGTGATACTACTCTT
CTTGGTCTATCTATGCCAGATGCTGTCAAATTTCCTTACATTGCATCAAT
GGGTGTTTACTTGTTTAGAACTGATGTCCTACTAAATCTCTTGAGATCTA
GCTATCCCTTATCCAATGACTTTGGCTCTGAAATTATTCCAGCTTCTGTG
AAGGATCACAATGTCCAAGCCTTTTTATTCAATGACTACTGGGAGGACAT
TGGAACAATAAAGTCCTTTTTTTATGCCAATTTGGCCCTCACAGAACAGC
CTGCGAAGTTTGAATTTTATGATCCCAAGACACCTTTCTATACGTCTGCT
AGATTCTGCCACCCACTAAGTGATCGATG
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