FC931623
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_LACLS (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=glgC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 76/228 (33.33%), Postives = 117/228 (51.32%), Query Frame = 2
Query: 23 NGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
NG+N G ++ ++ + G KWF+GT+ AV Q I + +N E VLILSGDH+Y+MDY L+ H + +A +TVS + + AS +G+M D + +II+F EKPK P +ASMG+Y+F L +L + Y N DFG ++IPA ++ NV A+ F YW+D+GTI S +++ + + D Y+
Sbjct: 78 NGINSGVTILQPYSSQE-----GSKWFEGTSHAVYQNISYIDQ---QNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEEASRFGIMNTDDNDRIIEFEEKPKEPKSN---------------------LASMGIYIFNWKRLREVLVNGYSKGNPIEDFGGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYS 276
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_LACLA (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 76/228 (33.33%), Postives = 117/228 (51.32%), Query Frame = 2
Query: 23 NGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
NG+N G ++ ++ + G KWF+GT+ AV Q I + +N E VLILSGDH+Y+MDY L+ H + +A +TVS + + AS +G+M D + +II+F EKPK P +ASMG+Y+F L +L + Y N DFG ++IPA ++ NV A+ F YW+D+GTI S +++ + + D Y+
Sbjct: 78 NGINSGVTILQPYSSQE-----GSKWFEGTSHAVYQNISYIDQ---QNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEEASRFGIMNTDDNDRIIEFEEKPKEPKSN---------------------LASMGIYIFNWKRLREVLVNGYSKGNPMEDFGGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYS 276
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SHISS (Glucose-1-phosphate adenylyltransferase OS=Shigella sonnei (strain Ss046) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SHIFL (Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri GN=glgC PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SHIF8 (Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_SHIDS (Glucose-1-phosphate adenylyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_LACLM (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 77/233 (33.05%), Postives = 117/233 (50.21%), Query Frame = 2
Query: 14 NLGNGVNFGDGFVEVLAATQTP--GEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
++GNG +G + P + G KWF+GT+ AV Q I + +N E VLILSGDH+Y+MDY L+ H + +A +TVS + + AS +G+M D + +II+F EKPK P +ASMG+Y+F L +L + Y N DFG ++IPA ++ NV A+ F YW+D+GTI S +++ + + D Y+
Sbjct: 68 HIGNGAPWGLNGINRGVTILQPYFSQEGSKWFEGTSHAVYQNISYIDQ---QNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEEASRFGIMNTDDNDRIIEFEEKPKEPKSN---------------------LASMGIYIFNWKRLREVLVNGYSKGNPMEDFGGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYS 276
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOSM (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOSE (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain SE11) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLU (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
FV++L A Q G+ W++GTADAV Q + + K E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F EKP P SMP+ +ASMG+Y+F D L LL S+DFG ++IP + A F YW D+GT+++++ ANL L + + YD P T
Sbjct: 98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308 The following BLAST results are available for this feature:
BLAST of FC931623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931623 ID=FC931623; Name=FC931623; organism=Citrus clementina; type=EST; length=729bpback to top |