FC931623

Overview
NameFC931623
Unique NameFC931623
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLI (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12) GN=glgC PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLC (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOL6 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6 GN=glgC PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOL5 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOHS (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECODH (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECOBW (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECO8A (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O8 (strain IAI1) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECO81 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O81 (strain ED1a) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
[Close]
BLAST of FC931623 vs. ExPASy Swiss-Prot
Match: GLGC_ECO7I (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 2 
Query:   47 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFYANLALTEQPAKFEFYDPKTPFYT 694
            FV++L A Q     G+ W++GTADAV Q + +    K    E V+IL+GDH+Y+ DY+  L  H++  A  TV+C+P+    AS +G+M +D + +II+F EKP  P              SMP+      +ASMG+Y+F  D L  LL         S+DFG ++IP   +     A  F             YW D+GT+++++ ANL L     + + YD   P  T
Sbjct:   98 FVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-------------SMPNDPS-KSLASMGIYVFDADYLYELLEEDDRDKNSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRT 308
The following BLAST results are available for this feature:
BLAST of FC931623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
GLGC_ECOLI6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOLC6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOL66.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOL56.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOHS6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECODH6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOBW6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO8A6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO816.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO7I6.838e-2733.91Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionC34107C01EF PostHarvP1 Citrus clementina cDNA clone C34107C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931623 ID=FC931623; Name=FC931623; organism=Citrus clementina; type=EST; length=729bp
GGCGCGGTCGTATAATCTTGGAAATGGTGTGAATTTTGGGGATGGGTTTG
TAGAGGTTCTGGCTGCTACTCAAACTCCTGGAGAAGCAGGAAAGAAGTGG
TTCCAAGGGACAGCAGATGCTGTGAGGCAATTTATATGGGTCTTTGAGGA
CGCCAAGAATAAGAATGTGGAGAATGTTTTGATCTTGTCTGGTGATCACC
TTTACCGGATGGACTATACAGAGTTTCTGCAGAAGCATATCGACACAAAA
GCTGATATTACAGTCTCATGTGTACCAATGGATGACTGCCGTGCATCAGA
TTATGGACTAATGAAGATTGACCGCTCAGGGCAAATCATCCAATTTGCTG
AGAAACCTAAGGGCCCTGATCTGAAAGGAATGCAATGTGATACTACTCTT
CTTGGTCTATCTATGCCAGATGCTGTCAAATTTCCTTACATTGCATCAAT
GGGTGTTTACTTGTTTAGAACTGATGTCCTACTAAATCTCTTGAGATCTA
GCTATCCCTTATCCAATGACTTTGGCTCTGAAATTATTCCAGCTTCTGTG
AAGGATCACAATGTCCAAGCCTTTTTATTCAATGACTACTGGGAGGACAT
TGGAACAATAAAGTCCTTTTTTTATGCCAATTTGGCCCTCACAGAACAGC
CTGCGAAGTTTGAATTTTATGATCCCAAGACACCTTTCTATACGTCTGCT
AGATTCTGCCACCCACTAAGTGATCGATG
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