FC931630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_THET8 (Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpB PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEF--VNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALE 678 ETGAGQHGV+ ATV A FGL+C+VYMG +D+ RQALNVFRM+LLGAEVR V +G+ TLKDAT+EAIRDW+TNV TT YILGSV GPHPYPMMVRDF +VIG+E +RQ+LE +G PD LIA VGGGSNA+GLF F + + +LIGVEAAG GL +G+HAA++ G+ GVLHG+ YLL D DGQI HS+SAGLDYPGVGPEHS+ D G AEY +VTD+EALE Sbjct: 131 ETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALE 358
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_THET2 (Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpB PE=1 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEF--VNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALE 678 ETGAGQHGV+ ATV A FGL+C+VYMG +D+ RQALNVFRM+LLGAEVR V +G+ TLKDAT+EAIRDW+TNV TT YILGSV GPHPYPMMVRDF +VIG+E +RQ+LE +G PD LIA VGGGSNA+GLF F + + +LIGVEAAG GL +G+HAA++ G+ GVLHG+ YLL D DGQI HS+SAGLDYPGVGPEHS+ D G AEY +VTD+EALE Sbjct: 117 ETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALE 344
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_RHOFD (Tryptophan synthase beta chain OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpB PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 151/233 (64.81%), Postives = 186/233 (79.83%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGG------KPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATAT+CAR+GL+C+VYMG++D++RQ+ NV+RM LLGA V V SG+ TLKDA +EA+RDWV NV+ T YI+G+VAGPHPYPMMVRDF +VIGKE Q E +PD ++ACVGGGSNAMG+FH ++ + RLIGVEAAG G+ SGKH+A+L +G GVLHG +Y+LQD++GQ+ E HSISAGLDYPGVGPEH+FLKD GRAEY +TD EAL A Sbjct: 114 ETGAGQHGVATATICARYGLECVVYMGSEDVKRQSPNVYRMNLLGATVVPVESGSRTLKDALNEAMRDWVANVDNTFYIIGTVAGPHPYPMMVRDFQSVIGKECLVQMPEMLQAAGCHTTQPDAVVACVGGGSNAMGIFHPYIAHEATRLIGVEAAGLGMDSGKHSASLQRGSPGVLHGNRTYVLQDDNGQVTETHSISAGLDYPGVGPEHAFLKDIGRAEYVGITDQEALAA 346
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_RHIME (Tryptophan synthase beta chain OS=Rhizobium meliloti GN=trpB PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 150/227 (66.08%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV ARFGL C+VYMGA D+ERQA NVFRM+LLGAEV+ V +G TLKDA +EA+RDWVTNV++T+Y++G+ AGPHPYP MVRDF AVIG+E ++Q LE G PD+++A VGGGSNA+G+FH F++D+ VR++GVEA G GL +H A+L+ G GVLHG +YLLQD DGQI E HSISAGLDYPG+GPEH++L D GR EY + D EALEA Sbjct: 121 ETGAGQHGVASATVAARFGLPCVVYMGATDVERQAPNVFRMKLLGAEVKPVTAGNGTLKDAMNEALRDWVTNVDSTYYLIGTAAGPHPYPEMVRDFQAVIGEEAKQQILEAEGRLPDLVVAAVGGGSNAIGIFHSFLDDEGVRIVGVEAGGKGLDGDEHCASLTAGSPGVLHGNRTYLLQDGDGQIKEGHSISAGLDYPGIGPEHAWLNDIGRVEYVPIMDHEALEA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_JANSC (Tryptophan synthase beta chain OS=Jannaschia sp. (strain CCS1) GN=trpB PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 155/228 (67.98%), Postives = 184/228 (80.70%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSG-KHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATATVCA+FGL+CIVYMGA D+ERQA NVFRM+LLGAEV V SG TLKDA ++A+RDWVTNV T Y +G+VAGPHPYP MVRDF A+IGKETR Q + G PD LIA +GGGSNAMGLF F++DK V +IGVEA G G+ +H A+L+ G GVLHG +YLLQDEDGQI+E HSISAGLDYPG+GPEH++L + GRA+Y ++TD EAL+A Sbjct: 120 ETGAGQHGVATATVCAKFGLKCIVYMGATDVERQAPNVFRMKLLGAEVVPVTSGRGTLKDAMNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQAIIGKETRDQMMAAEGRLPDTLIAAIGGGSNAMGLFFPFLDDKSVNIIGVEAGGHGVNEKMEHCASLTGGRPGVLHGNRTYLLQDEDGQILEGHSISAGLDYPGIGPEHAWLHEIGRAQYVSITDREALDA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_BRUME (Tryptophan synthase beta chain OS=Brucella melitensis GN=trpB PE=3 SV=2) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 149/227 (65.64%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV ARFGL CIVY+GA D+ERQ NVFRM+LLGAEV+ V +G TLKDA +EA+RDWVTNVE T+Y++G+ AGPHPYP +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GL +H A++S G GVLHG +YLLQ+ DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + D+EAL+A Sbjct: 121 ETGAGQHGVASATVAARFGLPCIVYVGASDVERQKPNVFRMKLLGAEVKPVSAGNGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGTEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLEGEEHCASMSAGRPGVLHGNRTYLLQNADGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDNEALDA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_BRUMB (Tryptophan synthase beta chain OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=trpB PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.209e-85 Identity = 149/227 (65.64%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV ARFGL CIVY+GA D+ERQ NVFRM+LLGAEV+ V +G TLKDA +EA+RDWVTNVE T+Y++G+ AGPHPYP +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GL +H A++S G GVLHG +YLLQ+ DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + D+EAL+A Sbjct: 121 ETGAGQHGVASATVAARFGLPCIVYVGASDVERQKPNVFRMKLLGAEVKPVSAGNGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGTEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLEGEEHCASMSAGRPGVLHGNRTYLLQNADGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDNEALDA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_BRUAB (Tryptophan synthase beta chain OS=Brucella abortus GN=trpB PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.886e-85 Identity = 149/227 (65.64%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV ARFGL CIVY+GA D+ERQ NVFRM+LLGAEV+ V +G TLKDA +EA+RDWVTNVE T+Y++G+ AGPHPYP +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GL +H A++S G GVLHG +YLLQ+ DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + D+EAL+A Sbjct: 121 ETGAGQHGVASATVAARFGLPCIVYVGATDVERQKPNVFRMKLLGAEVKPVSAGNGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGTEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLEGEEHCASMSAGRPGVLHGNRTYLLQNADGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDNEALDA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_BRUA2 (Tryptophan synthase beta chain OS=Brucella abortus (strain 2308) GN=trpB PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.886e-85 Identity = 149/227 (65.64%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV ARFGL CIVY+GA D+ERQ NVFRM+LLGAEV+ V +G TLKDA +EA+RDWVTNVE T+Y++G+ AGPHPYP +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GL +H A++S G GVLHG +YLLQ+ DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + D+EAL+A Sbjct: 121 ETGAGQHGVASATVAARFGLPCIVYVGATDVERQKPNVFRMKLLGAEVKPVSAGNGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGTEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLEGEEHCASMSAGRPGVLHGNRTYLLQNADGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDNEALDA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_BRUA1 (Tryptophan synthase beta chain OS=Brucella abortus (strain S19) GN=trpB PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.886e-85 Identity = 149/227 (65.64%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV ARFGL CIVY+GA D+ERQ NVFRM+LLGAEV+ V +G TLKDA +EA+RDWVTNVE T+Y++G+ AGPHPYP +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GL +H A++S G GVLHG +YLLQ+ DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + D+EAL+A Sbjct: 121 ETGAGQHGVASATVAARFGLPCIVYVGATDVERQKPNVFRMKLLGAEVKPVSAGNGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGTEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLEGEEHCASMSAGRPGVLHGNRTYLLQNADGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDNEALDA 347 The following BLAST results are available for this feature:
BLAST of FC931630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 447
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931630 ID=FC931630; Name=FC931630; organism=Citrus clementina; type=EST; length=682bpback to top |