FC931630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_METS4 (Tryptophan synthase beta chain OS=Methylobacterium sp. (strain 4-46) GN=trpB PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 3.083e-87 Identity = 152/227 (66.96%), Postives = 185/227 (81.50%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATAT+CARFGL+C+VYMGA D+ERQ NVFRM++LGAEV V SGT TLKDA +EA+RDWVTNV T Y +G+VAGPHPYP MVRDF +VIG+ETR Q L + G PD L+AC+GGGSNAMGLFH F++D+++ + GVEAAG G+ SG HAA+L+ G+ GVLHG +YLL +EDGQI + HSISAGLDYPG+GPEH++L + GR Y + TD E LEA Sbjct: 121 ETGAGQHGVATATLCARFGLKCVVYMGAVDVERQKPNVFRMKMLGAEVVPVQSGTRTLKDAMNEALRDWVTNVADTFYCIGTVAGPHPYPAMVRDFQSVIGRETREQMLAQEGRLPDSLVACIGGGSNAMGLFHPFLDDREIEIYGVEAAGHGVSSGLHAASLTGGKPGVLHGNRTYLLMNEDGQIADAHSISAGLDYPGIGPEHAWLHEVGRVTYLSATDSETLEA 347
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_EXIS2 (Tryptophan synthase beta chain OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpB PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 5.259e-87 Identity = 151/227 (66.52%), Postives = 187/227 (82.38%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATATVCA L+C+++MG +D+ RQ LNVFRM LLGA+V +V G+ TLKDA +EA+R WV +V+ THY++GSV GPHP+P +VRDF AVIG+ETR Q LEK G P+ ++ACVGGGSNA+G+FH F++D++V L G+EAAG GL + KHAAT+SKGEVGVLHG++ YLLQDE GQ+ E HSISAGLDYPGVGPEHS LKD GR +Y VTD +AL+A Sbjct: 114 ETGAGQHGVATATVCALLDLECVIFMGEEDIRRQELNVFRMELLGAKVVSVTQGSRTLKDAVNEALRYWVKHVDDTHYLMGSVLGPHPFPEIVRDFQAVIGQETRTQILEKEGKLPEAIVACVGGGSNAIGMFHPFIDDEEVALYGIEAAGSGLETEKHAATMSKGEVGVLHGSMMYLLQDEHGQVTEAHSISAGLDYPGVGPEHSLLKDIGRVQYEAVTDQQALDA 340
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_DECAR (Tryptophan synthase beta chain OS=Dechloromonas aromatica (strain RCB) GN=trpB PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 5.259e-87 Identity = 153/227 (67.40%), Postives = 189/227 (83.26%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATATV AR+G++C+VYMG++D++RQA NV+RM+LLGA V V SG+ TLKDA +EA+RDWVTN+ T YI+G+VAGPHPYPM+VRDF +IG+E Q E G +PD +IACVGGGSNAMG+F+ ++N + VRLIGVEAAG G+ +G+H+A+L+ G GVLHG +YLLQDEDGQIIE HS+SAGLDYPGVGPEH++LKD GRAEY VTD EAL A Sbjct: 114 ETGAGQHGVATATVAARYGMECVVYMGSEDVKRQAANVYRMKLLGATVVPVESGSKTLKDALNEAMRDWVTNIHNTFYIIGTVAGPHPYPMLVRDFQKIIGEECLVQMPEMTGRQPDAVIACVGGGSNAMGIFYPYINVEGVRLIGVEAAGDGMETGRHSASLTAGVPGVLHGNRTYLLQDEDGQIIETHSVSAGLDYPGVGPEHAWLKDLGRAEYQPVTDSEALAA 340
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_XANCP (Tryptophan synthase beta chain OS=Xanthomonas campestris pv. campestris GN=trpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87 Identity = 150/227 (66.08%), Postives = 187/227 (82.38%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV AR GL+C+VYMGA D+ERQ +NV+RM+LLGA+V V SG+ATLKDA +EA+RDWV+NV+ T YI+G+VAGP PYP MVRDF+A++G+E R Q LE +G PD + ACVGGGSNA+GLFH F+ND V++ G EAAG G+ SG+HAA+++ G GVLHG +Y++ D+DGQIIE HS+SAGLDYPGVGPEH+FL D GRA Y +TDDEAL A Sbjct: 120 ETGAGQHGVASATVAARLGLECVVYMGATDIERQKINVYRMQLLGAKVIPVTSGSATLKDALNEAMRDWVSNVQDTFYIIGTVAGPDPYPRMVRDFNAIVGREARAQMLEDYGRLPDAISACVGGGSNAIGLFHAFLNDPGVKIYGAEAAGDGIASGRHAASIAAGRPGVLHGNRTYVICDDDGQIIETHSVSAGLDYPGVGPEHAFLSDSGRAVYQGITDDEALAA 346
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_XANCB (Tryptophan synthase beta chain OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87 Identity = 150/227 (66.08%), Postives = 187/227 (82.38%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV AR GL+C+VYMGA D+ERQ +NV+RM+LLGA+V V SG+ATLKDA +EA+RDWV+NV+ T YI+G+VAGP PYP MVRDF+A++G+E R Q LE +G PD + ACVGGGSNA+GLFH F+ND V++ G EAAG G+ SG+HAA+++ G GVLHG +Y++ D+DGQIIE HS+SAGLDYPGVGPEH+FL D GRA Y +TDDEAL A Sbjct: 120 ETGAGQHGVASATVAARLGLECVVYMGATDIERQKINVYRMQLLGAKVIPVTSGSATLKDALNEAMRDWVSNVQDTFYIIGTVAGPDPYPRMVRDFNAIVGREARAQMLEDYGRLPDAISACVGGGSNAIGLFHAFLNDPGVKIYGAEAAGDGIASGRHAASIAAGRPGVLHGNRTYVICDDDGQIIETHSVSAGLDYPGVGPEHAFLSDSGRAVYQGITDDEALAA 346
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_XANC8 (Tryptophan synthase beta chain OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87 Identity = 150/227 (66.08%), Postives = 187/227 (82.38%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVA+ATV AR GL+C+VYMGA D+ERQ +NV+RM+LLGA+V V SG+ATLKDA +EA+RDWV+NV+ T YI+G+VAGP PYP MVRDF+A++G+E R Q LE +G PD + ACVGGGSNA+GLFH F+ND V++ G EAAG G+ SG+HAA+++ G GVLHG +Y++ D+DGQIIE HS+SAGLDYPGVGPEH+FL D GRA Y +TDDEAL A Sbjct: 120 ETGAGQHGVASATVAARLGLECVVYMGATDIERQKINVYRMQLLGAKVIPVTSGSATLKDALNEAMRDWVSNVQDTFYIIGTVAGPDPYPRMVRDFNAIVGREARAQMLEDYGRLPDAISACVGGGSNAIGLFHAFLNDPGVKIYGAEAAGDGIASGRHAASIAAGRPGVLHGNRTYVICDDDGQIIETHSVSAGLDYPGVGPEHAFLSDSGRAVYQGITDDEALAA 346
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_SULSY (Tryptophan synthase beta chain OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=trpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87 Identity = 149/226 (65.93%), Postives = 186/226 (82.30%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALE 678 ETGAGQHGV+TAT + FGL+C +YMG +D ERQALNVFRM+LLGAEV+ V +G+ TLKDA +EA+RDWVTNV+TTHYI+GS GPHP+PM+VRDF +VIG+E ++Q LE G PDV++ACVGGGSNA+G+F+ F+ D VRL+GVEA G+G+ +G HAA+++ G +GVLHG SY +QDE GQI HSISAGLDYPGVGPEH+FLK+ RAEY TD+EALE Sbjct: 113 ETGAGQHGVSTATAASLFGLECTIYMGEEDAERQALNVFRMKLLGAEVKIVKAGSRTLKDAVNEALRDWVTNVKTTHYIIGSALGPHPFPMIVRDFQSVIGEEVKQQILEIEGKLPDVIVACVGGGSNAIGIFYPFIEDTQVRLVGVEAGGYGIETGMHAASINGGTIGVLHGMKSYFIQDEWGQIESTHSISAGLDYPGVGPEHAFLKEIKRAEYITATDEEALE 338
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_CHRVO (Tryptophan synthase beta chain OS=Chromobacterium violaceum GN=trpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87 Identity = 153/228 (67.11%), Postives = 189/228 (82.89%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKG-EVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATATV AR+G++C+VYMGA+D++RQ+ NVFRM+LLGA V V SG+ TLKDA +EA+RDWVTNV++T YILG+ AGPHPYPM+VRDF +VIG E++ Q E G +PDV++ACVGGGSNA+G+FH ++ VR++GVEA G G+ SGKHAA +S G VGVLHG+ SYL+QD DGQI+E HS+SAGLDYPGVGPEH LKD GRAEY ++ DDEAL A Sbjct: 114 ETGAGQHGVATATVAARYGMECVVYMGAEDVKRQSPNVFRMKLLGATVVPVESGSKTLKDALNEAMRDWVTNVDSTFYILGTAAGPHPYPMLVRDFVSVIGAESKIQMPEAIGRQPDVVVACVGGGSNAIGMFHPYIEVPGVRMVGVEAGGHGVASGKHAAPISSGAPVGVLHGSKSYLMQDADGQIVETHSVSAGLDYPGVGPEHCHLKDIGRAEYVSIDDDEALRA 341
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_BACWK (Tryptophan synthase beta chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87 Identity = 150/227 (66.08%), Postives = 190/227 (83.70%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATATVCA FGL+C+++MG +D+ RQ LNVFRM LLGA+V +V +G+ TLKDA +EA+R WV++V THYI+GSV GPHP+P +VRDF +VIGKET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TD+EALEA Sbjct: 113 ETGAGQHGVATATVCALFGLECVIFMGEEDVRRQKLNVFRMELLGAKVESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDEEALEA 339
BLAST of FC931630 vs. ExPASy Swiss-Prot
Match: TRPB_RUTMC (Tryptophan synthase beta chain OS=Ruthia magnifica subsp. Calyptogena magnifica GN=trpB PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 8.970e-87 Identity = 155/229 (67.69%), Postives = 185/229 (80.79%), Query Frame = 1 Query: 1 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLGSG--KHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEA 681 ETGAGQHGVATATV AR GL+C+VYMG D+ RQALNVFRM+LLGA V V G+ TLKD+ +EA+RDWVTN++ T YI+G+V GPHPYPMMVRDF ++IGKET+ Q + GG PDVL+ACVGGGSNA+GLFH F++D V + GVEAAG+GL G H+A L G VGVLHG +YL++DE+GQIIE HSISAGLDYPGVGPEH++LKD GRA Y +TD EALEA Sbjct: 114 ETGAGQHGVATATVAARLGLECVVYMGEVDVARQALNVFRMKLLGATVIPVTLGSKTLKDSINEAMRDWVTNIDDTFYIIGTVVGPHPYPMMVRDFQSIIGKETKVQFAAQVGGLPDVLVACVGGGSNAIGLFHAFIDDASVEIYGVEAAGYGLEKGPTAHSAPLCAGSVGVLHGNRTYLMEDENGQIIEGHSISAGLDYPGVGPEHAYLKDSGRARYVAITDKEALEA 342 The following BLAST results are available for this feature:
BLAST of FC931630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 447
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931630 ID=FC931630; Name=FC931630; organism=Citrus clementina; type=EST; length=682bpback to top |