FC931632

Overview
NameFC931632
Unique NameFC931632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_PARDP (Anthranilate phosphoribosyltransferase OS=Paracoccus denitrificans (strain Pd 1222) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 82/230 (35.65%), Postives = 115/230 (50.00%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLEA 687
            A  A I   L+ +R +GET  E+    RAM     +++    A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  LG+ +   PE     +   GI FMM+  +HPAM+ V P R +L  +T+FN+LGPM NP  V   + G ++      MA  L+  G + A +VH  +G DE+S   P  +  +   +I  F   P D G+P    EA
Sbjct:   36 ATPAQIGGLLMAMRVRGETVEEMAAATRAMRARMNRIKAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGSADALTHLGLNVMSTPEIAEAALAATGICFMMAPVHHPAMRHVGPARAELGTRTIFNLLGPMTNPGLVKRQLTGTFDRVWNRPMAETLRELGSECAWLVHGGDGTDEISIAEPTWVAQLKDGEITEFQISPEDAGLPVHPFEA 265          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_NOCSJ (Anthranilate phosphoribosyltransferase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 83/224 (37.05%), Postives = 115/224 (51.34%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPR 672
            A  A I+ F + LRAKGET  E+ GL   M   AT +   G  +DIVGTGGD + +VNIST ++I+AA  GA+V K             DVLE+LG+ +DL          E GI F  +  +HPAM++    R++L V T FN LGP+ NPA      +G  +  +   MA    R G+   +    +GLDE++      +  V   ++   S DP D GI R
Sbjct:   34 ATVAQIAGFAIALRAKGETVEEVSGLVDTMYALATPISVPGRLLDIVGTGGDRSMSVNISTMSAIVAAGAGARVVKHGNRSASSQSGSADVLESLGIRLDLPAARLAEIAAEVGITFCFAAAFHPAMRYAAVPRRELGVGTTFNFLGPLTNPAHAHAQAIGCADPRMAPVMAGVFARRGVDAWVFRGDDGLDELTTTTTSRLWWVHGGEVRETSVDPADLGIAR 257          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_METST (Anthranilate phosphoribosyltransferase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32
Identity = 80/226 (35.40%), Postives = 123/226 (54.42%), Query Frame = 1
Query:   13 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH------SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGI 666
            ++S+FL  LR KGET  EI GL R+M  +A +++   +   ++  GTGGD   T N+ST ASI+A+A GAK++K             D LEALGV I+L PE     +D+    F+ +  YH A K V  +RK+LK +TVFN+LGP+  P  V   + G+Y+  L+  +A      G++  ++VH      +  +DE+S +G   +  +    I      P D+G+
Sbjct:   37 VVSSFLTALRMKGETIDEITGLTRSMKNHAVQIDYKPEDYLIETCGTGGDTFKTFNVSTVASIIASAGGAKISKHGNRSVSSKFGGADALEALGVNIELSPEKVINSIDKCNFAFIFAPIYHVATKNVMMIRKQLKTRTVFNLLGPISCPTNVNARLTGIYDPELLETIAKVAMNLGVECGMIVHGFDENGNPAMDEISNIGKTKVAFIDNGDITVKYITPEDFGL 262          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_PROMT (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 84/225 (37.33%), Postives = 126/225 (56.00%), Query Frame = 1
Query:   22 AFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLEA 687
            AFL   RAKG +  E+  +A+ +   +T    L   D VD  GTGGDGANT NISTG + ++AA G K+AK             DVLE LG+ +++        + + GI F+ +  +HP++  + P+RK L V+T+FN+LGP++NP      V+GV   +L+  M+ AL+  GLKRA+VVH + GLDE S  G      + ++ I      P D G+ + + E+
Sbjct:   46 AFLAAFRAKGVSGDELSAMAKILQDASTTPSDLPSFDLVDTCGTGGDGANTFNISTGVAFVSAALGVKIAKHGNRSASGKVGSADVLENLGLPLNVSSGKVVEALKKLGITFLFAPSWHPSLVNLAPLRKSLGVRTIFNLLGPLVNPLRPKSQVLGVAKADLLDPMSVALKGMGLKRAVVVHGAGGLDEASLAGANQFRFLDKDVIRSEIISPGDLGLTQISNES 270          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_HELAH (Anthranilate phosphoribosyltransferase OS=Helicobacter acinonychis (strain Sheeba) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 77/219 (35.16%), Postives = 121/219 (55.25%), Query Frame = 1
Query:   16 ISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIP 669
            + A L  L+ KGE+  EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++      C+ E+  GF+ +  YH + K   P+RK+L  KT+FN LGP++NP      ++GVY+E+L   M  AL+  G+KRA+VV+  G DE+         ++   +I  +     D+ +P
Sbjct:   36 LGAILCALKIKGESLSEISAAATTLLEHAPKPFKSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLPMAKHGSRSVSSHSGSADLLENLGVNIEMNRAQLENCLKESHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGPLINPLRPTIQLLGVYDESLCKTMVLALKALGVKRAMVVNGGGTDEIVLHAITHACELKNNEILEYDLSAKDFNLP 254          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_ERYLH (Anthranilate phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 82/230 (35.65%), Postives = 121/230 (52.61%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLEA 687
            A E  I+ FL+ +  + ET  EI G ARA+      VE    AVD  GTGGDG +T+N+ST  S++ AA G  VAK             D LEALG+ ++       + + E GI F+ +  +HPAM  ++P+R++L  +T+FN++GP+ NPA V   ++G+     V   A A  + G +R  +V   EGLDE+S  G   + DV   + E         G+P   +EA
Sbjct:   28 ASEEEIARFLLAMTERSETADEIAGAARALRDRLIPVEAPEGAVDCCGTGGDGHHTLNVSTAVSLVVAAAGVPVAKHGNRAASSKSGAADTLEALGLDMEAVGRTAEKTLAEIGICFLFAKNHHPAMGRIQPIRQRLGKRTIFNLMGPLSNPAGVKRQLIGIARPGYVPIYAEAKAKLGTERTYIVSGDEGLDELSLAGGNELADVCGNEFEMRRVYAEMIGLPHAPVEA 257          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CLAM3 (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 82/230 (35.65%), Postives = 121/230 (52.61%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTV-NISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLEA 687
            A  A +   LV LRA GET  EIVG   A+++ A  ++    A+DIVGTGGD    V NIS+ AS++AAA G  V K             DVL ALGV + + PE     + E GI +  +  +HP  +     R++L + T+FN+LGP+ NPA    + VGV + + V  M    +  G    +    +G+D+++  G   I +V++  +     DPL+ GIPR  +EA
Sbjct:   37 ATPAQLGGLLVALRASGETVDEIVGFRDAVLEEALPLDADPRALDIVGTGGDPYGAVLNISSVASVIAAAAGVPVIKHGNRGASSASGASDVLTALGVDLSITPERVAEVLRETGITYAHAALFHPGFRHAAATRRELGISTLFNVLGPLCNPARPEASAVGVADLSRVPLMVGVFRTRGATALVYRGDDGIDKLTTTGHSHIWEVSRGAVTEHDLDPLELGIPRAPIEA 266          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_SYNS3 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain CC9311) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 84/225 (37.33%), Postives = 118/225 (52.44%), Query Frame = 1
Query:   22 AFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLEA 687
            AFL   RA+     E+  +A  + K     +   +   VD  GTGGDGA+T NIST  +  AAACGA VAK             DVLE LG+ +    E     +  +G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV    L+  MA ALQ+ GL RA+VVH + GLDE S  GP  +  +    +        D+G+    LEA
Sbjct:   45 AFLAAFRARDVQGSELAAMAEVLRKACALPDAKPNLGLVDTCGTGGDGADTFNISTAVAFTAAACGAHVAKHGNRSASGKVGSADVLEGLGLHLKAPLESVLGALPASGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLTPEAQVLGVAKAELLDPMAEALQQLGLTRAVVVHGAGGLDEASLEGPNEVRILENGNVRSDQLSASDFGLTLAPLEA 269          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_SYNR3 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain RCC307) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 87/226 (38.50%), Postives = 127/226 (56.19%), Query Frame = 1
Query:   22 AFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLEA 687
            AFL  LR +     E+  +AR +++ A+ +     A   VD  GTGGDGA++ NIST  +  AAACG  VAK             DVLE LG+ +    +     +++AGI F+ +  +HPA+K + P+RK L V+TVFN+LGP++NP      V+GV  E+L+  MA ALQ  GLKRA+VV+   GLDE S  G   ++ +   ++ R   DP   G+    ++A
Sbjct:   42 AFLAALRCRNYRPVELAAMAR-VLRAASPLPCPRPALPLVDTCGTGGDGADSFNISTAVAFTAAACGVVVAKHGNRSASGKVGSADVLEGLGLQLQAPLQQVVGALEQAGITFLFAPGWHPALKSLAPLRKCLGVRTVFNLLGPLVNPLQPDAQVLGVATEDLLEPMAGALQLLGLKRAVVVYGHGGLDEASLSGTNQLMVLEDGQLRRDQLDPQALGLALQPIDA 266          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_SULTO (Anthranilate phosphoribosyltransferase OS=Sulfolobus tokodaii GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 81/221 (36.65%), Postives = 124/221 (56.11%), Query Frame = 1
Query:    7 EALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGI 666
            E + + FLV L  KGE+  EI G A+AM   A  +     A+D  GTGGDG NT+N+ST  ++L +     VAK             DVLEALG  I + PE   + + E+   F+ +  YHPAMK V  VRK L V+T+FN+LGP+ NPA   + ++GV+++  + K+A A+ R    R ++ +    LDE+S  G   + ++ ++KI  ++    D+G+
Sbjct:   35 EIVTAGFLVGLATKGESVEEITGFAKAMRDNALHIN-FPSALDTAGTGGDGLNTLNVSTAVALLISQV-YPVAKHGNRAVSGKSGSADVLEALGYNIIVKPELAEKLIKESKFVFLFAQLYHPAMKNVANVRKTLGVRTIFNVLGPLTNPANARYQMIGVFSKEFLPKLAEAVVRLDYDRVILYNGFPSLDEISTQGITYVYEIEKDKIVSYTVSINDFGL 253          
The following BLAST results are available for this feature:
BLAST of FC931632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PARDP4.919e-3235.65Anthranilate phosphoribosyltransferase OS=Paracocc... [more]
TRPD_NOCSJ4.919e-3237.05Anthranilate phosphoribosyltransferase OS=Nocardio... [more]
TRPD_METST6.425e-3235.40Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_PROMT8.391e-3237.33Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_HELAH8.391e-3235.16Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_ERYLH8.391e-3235.65Anthranilate phosphoribosyltransferase OS=Erythrob... [more]
TRPD_CLAM38.391e-3235.65Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPD_SYNS31.096e-3137.33Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_SYNR31.096e-3138.50Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_SULTO1.096e-3136.65Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]

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Properties
Property NameValue
Genbank descriptionC34107C10EF PostHarvP1 Citrus clementina cDNA clone C34107C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931632 ID=FC931632; Name=FC931632; organism=Citrus clementina; type=EST; length=689bp
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGAAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGA
GGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATGTTG
AATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAACTT
GGTACTCAAAATGGCCAATGCACTGCAACGATTTGGCCTGAAAAGAGCAT
TGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCTGGT
CTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGATCC
ATTGGACTACGGCATTCCTCGCTGCACTTTAGAAGCTTG
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