FC931636

Overview
NameFC931636
Unique NameFC931636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 1
Query:  271 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP--------DETPAAAPKSSVKANSQKSVP------KACLSPVQPSLNQ 564
            E+ ++ +YRG+R+RPWG++AAEIRDP K  RVWLG+FNT               RG KA  NFP          TP     S   ++   ++P       A  SPV  +L++
Sbjct:   46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPLIGYYGISSATPVNNNLSETVSDGNANLPLVGDDGNALASPVNNTLSE 157          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query:  277 KRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKS 492
            + K  YRG+R RPWGK+AAEIRDPT +G RVWLGTF T              +RG KA +NFP E     P++
Sbjct:  132 EEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRA 204          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  289 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP---DETPAAAPKSSVKANSQKSVPKACLSP 543
            +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP   + +    P    ++ SQ S    C SP
Sbjct:   24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSST-LDCASP 110          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  247 VEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLN 561
            V+ A   T      +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP     A   S  ++ SQ S  ++      P+LN
Sbjct:    5 VKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSF----PNLN 105          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 1
Query:  292 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPS 555
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+  V+   ++  P+   S + P+
Sbjct:  103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPE-PVRLTVKRRSPEPASSSISPA 190          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 1
Query:  214 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 486
            RK  GS+ V            K   +YRG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP +   ++P
Sbjct:    2 RKGRGSSVVGPALPVTAGGSVKEP-RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSP 91          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  292 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSL 558
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+  V+  +++  P+   S +  +L
Sbjct:   99 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPE-PVRLTAKRRSPEPASSSISSAL 187          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 44/122 (36.07%), Postives = 58/122 (47.54%), Query Frame = 1
Query:  193 PSTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLS 540
            P  FSAG         + V    ++T     E  R   YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+       +++ P+   S
Sbjct:   67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASS 188          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  292 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF--------PDETPAAAPKSSVKANSQKSVPK 528
            YRG+RQRPWGK+AAEIRDP K G RVWLGTF T              +RG +A +NF        PD     + +SS  ++++   PK
Sbjct:  148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPK 235          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 1
Query:  268 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF--PDETPAAAPKSSVKANS 510
            T   ++  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NF  P E  + +  S+++++S
Sbjct:   19 TNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSENQSTSHSSTMESSS 101          
The following BLAST results are available for this feature:
BLAST of FC931636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
ERF77_ARATH1.661e-1236.61Ethylene-responsive transcription factor 10 OS=Ara... [more]
EF103_ARATH1.661e-1249.32Ethylene-responsive transcription factor 6 OS=Arab... [more]
ERF78_ARATH2.169e-1244.32Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF76_ARATH2.169e-1240.95Ethylene-responsive transcription factor 11 OS=Ara... [more]
ERF2_NICSY2.169e-1242.70Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF83_ARATH2.833e-1241.76Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF2_TOBAC2.833e-1242.22Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF1_TOBAC2.833e-1236.07Ethylene-responsive transcription factor 1 OS=Nico... [more]
EF100_ARATH2.833e-1243.18Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF4_NICSY3.699e-1243.37Ethylene-responsive transcription factor 4 OS=Nico... [more]

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Properties
Property NameValue
Genbank descriptionC34107D03EF PostHarvP1 Citrus clementina cDNA clone C34107D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931636 ID=FC931636; Name=FC931636; organism=Citrus clementina; type=EST; length=734bp
GACTGAAGAATCCAAAACTCTCTCAAGCCAAAGAAGCTGGAGCTGAAGAG
GTCATCCAACAAGAAGTACTCAAAGCCGATCGTCGACGATGACTTCGAGG
CTGATTTCCAAGGATTCAAGGACGATGAAGAAGAGTCTGACATTGATGGT
GACGTGGACGTTGATGCCGACTTGATGATGGCTGATATTAAGCCTTCCAC
TTTCTCAGCTGGTCGCAAGTCTCATGGATCTACAGCCGTGAAGCACGTTG
AACAAGCTAAAAAATCCACAGAAAGAAAGAGGAAGAATCAATATAGGGGA
ATTAGGCAGCGTCCATGGGGAAAATGGGCTGCTGAGATCCGTGACCCCAC
AAAAGGGGTTCGTGTCTGGCTAGGAACTTTCAATACCGCTGAAGAAGCCG
CTAGGGCTTATGATGCCGAGGCACGGAGGATCCGTGGGAAGAAAGCTAAG
GTTAACTTTCCAGATGAAACTCCTGCTGCTGCTCCAAAGAGCTCAGTGAA
GGCAAACTCTCAGAAATCCGTTCCCAAAGCTTGCCTAAGCCCCGTGCAGC
CAAGTTTGAACCAAAACTTCAATTACTTGAACAACTCCGATCAGGATTAC
TACAACAATGTGAGTATTCTGGAGGAGAAACCACAGTGAATCAGTATGGA
TATATGGGCTCCTTCCCTGATGATGGAGAACTAGGATTCAACCCTTTGTG
CCACAGCTGATGATACTCCTGTGTACTTCACTCT
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