FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 86/121 (71.07%), Postives = 101/121 (83.47%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVAYTK  D+LVGQIAKRQAV+NPENTF+S KRF+GR++ EV+DESK+VSY V +    NVK+ CP + KQF+ EE+SA VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPENTFYSSKRFVGRRVDEVNDESKEVSYGVEK-AGSNVKIKCPILDKQFSPEEVSAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNPX (Chaperone protein dnaK2 OS=Synechococcus sp. (strain WH8102) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 86/121 (71.07%), Postives = 102/121 (84.30%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS V+ MEGGKPT++ NAEG RTTPSVVAYTK  D+LVGQIAKRQAV+NP+NTF+SVKRFIGR++ EV++ESK+VSY V +    NVK+ CP + KQFA EE+SA VLR L
Sbjct:    3 KVVGIDLGTTNSCVSVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPDNTFYSVKRFIGRRVDEVNEESKEVSYGVEK-AGSNVKVKCPVLDKQFAPEEVSAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMP (Chaperone protein dnaK2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 85/121 (70.25%), Postives = 101/121 (83.47%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVAYTK  D+LVGQIAKRQAV+NPENTF+S KRF+GR++ EV++ESK+VSY + +    NVKL CP + KQF+ EE+SA VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPENTFYSAKRFVGRRVDEVNEESKEVSYGIEK-AGSNVKLKCPVLDKQFSPEEVSAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PROM5 (Chaperone protein dnaK OS=Prochlorococcus marinus (strain MIT 9515) GN=dnaK PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42
Identity = 85/121 (70.25%), Postives = 100/121 (82.64%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVAYTK  D+LVGQIAKRQAV+NPENTF+S KRF+GR++ EV++ESK VSY + +    NVKL CP + KQF+ EE+SA VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPENTFYSAKRFVGRRVDEVNEESKDVSYGIEK-AGSNVKLKCPVLDKQFSPEEVSAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CYAME (Chaperone protein dnaK OS=Cyanidioschyzon merolae GN=dnaK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.188e-41
Identity = 87/121 (71.90%), Postives = 98/121 (80.99%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS +A MEGG+PT+V N+EG RTTPSVVAYTK GD LVGQIAKRQAV+NP NTF+SVKRFIGRK SE++ E+KQV Y V  D  GNV++ C A  K FA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVIAVMEGGQPTVVPNSEGFRTTPSVVAYTKNGDLLVGQIAKRQAVINPGNTFYSVKRFIGRKFSEIEQEAKQVPYPVQADGKGNVRIFCSAKDKFFAPEEISAQVLRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PHATR (Chaperone protein dnaK OS=Phaeodactylum tricornutum GN=dnaK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.552e-41
Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VAA+EGG+P+++ NAEG RTTPS+VAYTK  + LVGQIAKRQAV+NPENTFFSVKRFIG K  E+  E+K++ Y+V  D+N N+K+ CPA+ + F+ EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVVAAIEGGQPSVIINAEGLRTTPSIVAYTKKEELLVGQIAKRQAVINPENTFFSVKRFIGSKEGEISKEAKKLPYKVSNDQNNNIKIKCPALNRDFSPEEISAQVLRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMA (Chaperone protein dnaK2 OS=Prochlorococcus marinus GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41
Identity = 84/121 (69.42%), Postives = 101/121 (83.47%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVAYTK  D+LVGQIAKRQAV+NPENTF+S KRF+GR++ EV++ESK+VSY V +    +VKL CP + KQF+ EE++A VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPENTFYSAKRFVGRRVDEVNEESKEVSYSVEK-SGSSVKLKCPVLDKQFSPEEVAAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PORYE (Chaperone protein dnaK OS=Porphyra yezoensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41
Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS +A MEGGKPT++ NAEG RTT SVVAYTK GD+LVGQIA+RQAV+NPENTF+SVKRFIGRK +E+  E +Q SY  V+    ++K+ CPA+ K FA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVIAVMEGGKPTVIPNAEGFRTTASVVAYTKSGDKLVGQIARRQAVINPENTFYSVKRFIGRKQNEISQEIRQTSYN-VKTSGSSIKIACPALNKDFAPEEISAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41
Identity = 87/121 (71.90%), Postives = 99/121 (81.82%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA +EGG+PT++ NAEG RTTPSVVA+TK  DRLVGQ+A+RQAV+NPENTF+SVKRFIGRK  E+ DE+KQV+YRVVRD   NVKL      K FA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVVAVLEGGQPTVIANAEGSRTTPSVVAFTKNHDRLVGQLARRQAVLNPENTFYSVKRFIGRKYDEITDEAKQVAYRVVRD-GSNVKLHSTNEDKDFAPEEISALVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CYACA (Chaperone protein dnaK OS=Cyanidium caldarium GN=dnaK PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41
Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 3
Query:  318 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            EK+VGIDLGTTNS +A ME GKP ++ N+EG RTTPSVVAY K GD LVGQIAKRQAV+NP NTF+SVKRFIGRK  E+++E++QV+Y+V +D +GNVK+ CP   K F  EEISA V+R L
Sbjct:    2 EKIVGIDLGTTNSVIAVMEMGKPAVIPNSEGFRTTPSVVAYAKNGDLLVGQIAKRQAVINPSNTFYSVKRFIGRKFEEINEENRQVTYQVNKDPSGNVKIYCPFKNKDFTPEEISAQVIRKL 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PROMT5.334e-4271.07Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK2_SYNPX5.334e-4271.07Chaperone protein dnaK2 OS=Synechococcus sp. (stra... [more]
DNAK2_PROMP5.334e-4270.25Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_PROM59.098e-4270.25Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK_CYAME1.188e-4171.90Chaperone protein dnaK OS=Cyanidioschyzon merolae ... [more]
DNAK_PHATR1.552e-4166.94Chaperone protein dnaK OS=Phaeodactylum tricornutu... [more]
DNAK2_PROMA2.027e-4169.42Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_PORYE3.457e-4168.60Chaperone protein dnaK OS=Porphyra yezoensis GN=dn... [more]
DNAK_GLOVI3.457e-4171.90Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_CYACA3.457e-4166.39Chaperone protein dnaK OS=Cyanidium caldarium GN=d... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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