FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_XANAC (Chaperone protein dnaK OS=Xanthomonas axonopodis pv. citri GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ M+GGK  ++ N+EG RTTPS+VAYTK G+ LVG  AKRQAV NP+NTF++VKR IGRK +  EV  +   V Y ++  +NG+  +   + GK+ A +EISA VL  +
Sbjct:    3 KIIGIDLGTTNSCVSIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQ-TSDGKRMAPQEISARVLEKM 124          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_VIBCM (Chaperone protein dnaK OS=Vibrio cholerae serotype O1 (strain M66-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 64/123 (52.03%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G KP ++ NAEG+RTTPSV+AYT  G+ LVGQ AKRQAV NP+NT F++KR IGR+    EV  + K + Y++V+ +NG+  ++  A G++ AA ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTD-GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVE--AKGQKMAAPQVSAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_VIBCH (Chaperone protein dnaK OS=Vibrio cholerae GN=dnaK PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 64/123 (52.03%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G KP ++ NAEG+RTTPSV+AYT  G+ LVGQ AKRQAV NP+NT F++KR IGR+    EV  + K + Y++V+ +NG+  ++  A G++ AA ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTD-GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVE--AKGQKMAAPQVSAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_VIBC3 (Chaperone protein dnaK OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 64/123 (52.03%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G KP ++ NAEG+RTTPSV+AYT  G+ LVGQ AKRQAV NP+NT F++KR IGR+    EV  + K + Y++V+ +NG+  ++  A G++ AA ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTD-GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVE--AKGQKMAAPQVSAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_TREPS (Chaperone protein dnaK OS=Treponema pallidum subsp. pallidum (strain SS14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 60/121 (49.59%), Postives = 90/121 (74.38%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+P ++ NAEG RTTPS++ +T  G R+VGQ AK Q V NPE+T +S+KRFIG + +E+  E+K+V Y++V  +  +V+++    GK ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGGEPVVIQNAEGGRTTPSIIGFTSDGGRVVGQPAKNQMVTNPEHTIYSIKRFIGSRFNELTGEAKKVPYKIV-PQGDDVRVEVE--GKLYSTQEISAFILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_TREPA (Chaperone protein dnaK OS=Treponema pallidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 60/121 (49.59%), Postives = 90/121 (74.38%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+P ++ NAEG RTTPS++ +T  G R+VGQ AK Q V NPE+T +S+KRFIG + +E+  E+K+V Y++V  +  +V+++    GK ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGGEPVVIQNAEGGRTTPSIIGFTSDGGRVVGQPAKNQMVTNPEHTIYSIKRFIGSRFNELTGEAKKVPYKIV-PQGDDVRVEVE--GKLYSTQEISAFILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPB (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 62/123 (50.41%), Postives = 89/123 (72.36%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA M+G  P ++ NAEG RTTPS+VA++  G+RLVGQ AKRQAV NPE TFF+VKR +GR+  +  V+ + K V Y++V+  NG+  ++  A  K ++  ++SA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMDGKAPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADA--KTYSPSQVSAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPF (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain Pf0-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ +E GK  ++ NAEG RTTPS++AY   G+ LVGQ AKRQAV NP NT F+VKR IGR+  E  V  + K V Y++V+  NG+  ++  A GKQ A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVSVLENGKAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEEVVQKDIKLVPYKIVKANNGDAWVE--ASGKQMAPPQISAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_AQUPY (Chaperone protein dnaK (Fragment) OS=Aquifex pyrophilus GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 3
Query:  321 KVVGIDLGT-TNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLG  TNS VA M G +  ++ N EG R TPSVV++TK  + LVG  AKR+A+++PENT +  KRFIGRK  EV +E+K+VSY+VV DE G+   D P  GK    EE+ A VLR L
Sbjct:    6 KIIGIDLGNETNSVVAVMMGDEAVVIQNQEGSRLTPSVVSWTKEKEVLVGDPAKRRAILDPENTVYESKRFIGRKFEEVKEEAKRVSYKVVPDEKGDAAFDIPNAGKLVRPEEVGAHVLRKL 127          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_VIBVY (Chaperone protein dnaK OS=Vibrio vulnificus (strain YJ016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 64/123 (52.03%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G KP ++ NAEG+RTTPSV+AYT  G+ LVGQ AKRQAV NPENT F++KR IGR+    EV  + + + Y++V+ +NG+  ++  A G++ AA ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTD-GETLVGQPAKRQAVTNPENTLFAIKRLIGRRFEDEEVQRDIEIMPYKIVKADNGDAWVE--AKGQKMAAPQVSAEVLKKM 122          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_XANAC1.507e-2852.85Chaperone protein dnaK OS=Xanthomonas axonopodis p... [more]
DNAK_VIBCM1.507e-2852.03Chaperone protein dnaK OS=Vibrio cholerae serotype... [more]
DNAK_VIBCH1.507e-2852.03Chaperone protein dnaK OS=Vibrio cholerae GN=dnaK ... [more]
DNAK_VIBC31.507e-2852.03Chaperone protein dnaK OS=Vibrio cholerae serotype... [more]
DNAK_TREPS1.507e-2849.59Chaperone protein dnaK OS=Treponema pallidum subsp... [more]
DNAK_TREPA1.507e-2849.59Chaperone protein dnaK OS=Treponema pallidum GN=dn... [more]
DNAK_RHOPB1.507e-2850.41Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_PSEPF1.507e-2852.85Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_AQUPY1.507e-2853.28Chaperone protein dnaK (Fragment) OS=Aquifex pyrop... [more]
DNAK_VIBVY1.968e-2852.03Chaperone protein dnaK OS=Vibrio vulnificus (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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