FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_VIBVU (Chaperone protein dnaK OS=Vibrio vulnificus GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 64/123 (52.03%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G KP ++ NAEG+RTTPSV+AYT  G+ LVGQ AKRQAV NPENT F++KR IGR+    EV  + + + Y++V+ +NG+  ++  A G++ AA ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTD-GETLVGQPAKRQAVTNPENTLFAIKRLIGRRFEDEEVQRDIEIMPYKIVKADNGDAWVE--AKGQKMAAPQVSAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DESAA (Chaperone protein dnaK OS=Desulfatibacillum alkenivorans (strain AK-01) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 62/120 (51.67%), Postives = 89/120 (74.17%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVL 674
            KV+GIDLGTTNS VA MEG +P ++TN +G RTTPS+V  +  G+RLVGQIAKRQA+ NP+NT F+VKR IGRK +  +V D+   + Y++V  +NG+  ++    GK+++ +EIS+ +L
Sbjct:    3 KVIGIDLGTTNSCVAVMEGKEPKVLTNPDGGRTTPSIVGISSSGERLVGQIAKRQAITNPQNTVFAVKRLIGRKFASQQVKDDMNVLPYQIVDGDNGDAYIELQ--GKKYSPQEISSFIL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DEIRA (Chaperone protein dnaK OS=Deinococcus radiodurans GN=dnaK PE=1 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K VGIDLGTTNS +A MEGG+P ++ NAEG RTTPSVVAY K  + LVGQIA+RQA +NP  T F VKRFIGR+  EV +E+ +  + V    +G+V+++    GK  A E++SA VLR L
Sbjct:    3 KAVGIDLGTTNSVIAVMEGGRPEVIVNAEGGRTTPSVVAY-KGDEILVGQIARRQAALNPAATLFEVKRFIGRRWDEVKEEAARSPFTVKEGPSGSVRIE--VNGKDLAPEQVSAEVLRKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF5 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 64/123 (52.03%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG K  ++ N+EG+RTTPS+VA T+ G+ LVG+ AKRQAV NPENT + VKR IGRK   +EV  + K V Y+V++ +NG+  ++     K+++A++ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGDKVKVIENSEGKRTTPSIVAITEEGEVLVGEAAKRQAVTNPENTVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVE--VRDKKYSAQQISAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF2 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 64/123 (52.03%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG K  ++ N+EG+RTTPS+VA T+ G+ LVG+ AKRQAV NPENT + VKR IGRK   +EV  + K V Y+V++ +NG+  ++     K+++A++ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGDKVKVIENSEGKRTTPSIVAITEEGEVLVGEAAKRQAVTNPENTVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVE--VRDKKYSAQQISAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ZYMMO (Chaperone protein dnaK OS=Zymomonas mobilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+P ++ NAEG RTTPS+VA+TK  +RL+GQ AKRQAV N ENT F+VKR IGR+  +     +++ V Y +VR  NG+  +   A G+ ++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGQPKVIENAEGARTTPSIVAFTKDSERLIGQPAKRQAVTNSENTIFAVKRLIGRRFDDPVTKRDTELVPYHIVRGSNGDAWV--KAGGQDYSPSQISAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFA (Chaperone protein dnaK OS=Xylella fastidiosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A +EGGK  ++ N+EG RTTPS+VAYTK G+ LVG  AKRQAV NP+NTF++VKR IGRK   +EV  +   V Y++ + +NG+  +   A  K+ A +EISA VL  +
Sbjct:    3 KIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWV-ATADAKKLAPQEISAKVLEKM 124          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THERP (Chaperone protein dnaK OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dnaK PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            +V+GIDLGTTNS +A +EGG+P ++ NAEG+R TPSVVA T  G+RLVG+ AKRQA+ NPENT +S+KRF+GR+    EV    K V Y+V R +NG V++      + +  +EISA +L+ L
Sbjct:    3 RVIGIDLGTTNSVMAVIEGGEPVVIPNAEGERLTPSVVAITPTGERLVGRFAKRQAITNPENTIYSIKRFMGRRFDDPEVQRTIKLVPYQVRRAQNGGVEVKMG--DRWYTPQEISAMILQKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_METSB (Chaperone protein dnaK OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 64/123 (52.03%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG  P ++ NAEG RTTPS+VA+T  G+RLVGQ AKRQ+V NPE TFF++KR IGR   +     +   V Y+++R  NG+  ++  A GKQ++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGTTPKVIENAEGARTTPSIVAFTDDGERLVGQPAKRQSVTNPERTFFAIKRLIGRTYDDPMTKKDMGLVPYKIIRASNGDAWVE--ADGKQYSPSQISAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 64/123 (52.03%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG RTTPS+VA+T  G+RLVGQ AKRQAV NPE TFF++KR IGR   +     +   V Y++ R +NG+  ++  A GK+++  +ISA  L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGTQPRVIENAEGARTTPSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWVE--ADGKKYSPSQISAFTLQKM 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_VIBVU1.968e-2852.03Chaperone protein dnaK OS=Vibrio vulnificus GN=dna... [more]
DNAK_DESAA1.968e-2851.67Chaperone protein dnaK OS=Desulfatibacillum alkeni... [more]
DNAK_DEIRA1.968e-2855.37Chaperone protein dnaK OS=Deinococcus radiodurans ... [more]
DNAK_ACIF51.968e-2852.03Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_ACIF21.968e-2852.03Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_ZYMMO2.570e-2852.03Chaperone protein dnaK OS=Zymomonas mobilis GN=dna... [more]
DNAK_XYLFA2.570e-2852.85Chaperone protein dnaK OS=Xylella fastidiosa GN=dn... [more]
DNAK_THERP2.570e-2852.03Chaperone protein dnaK OS=Thermomicrobium roseum (... [more]
DNAK_METSB2.570e-2852.03Chaperone protein dnaK OS=Methylocella silvestris ... [more]
DNAK_METPB2.570e-2852.03Chaperone protein dnaK OS=Methylobacterium populi ... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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