FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_NITMU (Chaperone protein dnaK OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 64/123 (52.03%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT+ G+ LVG  AKRQAV NP+NT F+VKR IGR+ +E  V  + K V Y +++ +N +  ++    GK+ A  E+SA VL  +
Sbjct:    3 KIIGIDLGTTNSCVAVMESGKPKVIENSEGARTTPSIVAYTEDGEILVGASAKRQAVTNPKNTLFAVKRLIGRRFNEEMVQRDIKMVPYTIIKADNNDAWIE--VRGKKVAPPEVSAQVLMKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG RTTPS+VA+T  G+RLVGQ AKRQAV NP  TFF++KR IGR   +     +   V Y +VR  NG+  ++  A GKQF+  +ISA  L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGTQPKVIENAEGARTTPSIVAFTDEGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYHIVRAGNGDAWVE--ADGKQFSPSQISAFTLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_JANMA (Chaperone protein dnaK OS=Janthinobacterium sp. (strain Marseille) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGGKP ++ N+EG RTTPSV+AY + G+ LVG  AKRQAV NP+NT ++VKR IGRK    EV  +   + Y++V+ +NG+  +      K+ AA++ISA +LR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGGKPKVIENSEGARTTPSVIAYQEDGEILVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKEVQKDIGMMPYQIVKADNGDAWIS--VRDKKLAAQQISAEILRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATW (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATU (Chaperone protein dnaK OS=Francisella tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATT (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATO (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATN (Chaperone protein dnaK OS=Francisella tularensis subsp. novicida (strain U112) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATM (Chaperone protein dnaK OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_FRATH (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE---VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A M+G    ++ NAEG RTTPSVVAYT  G+ LVGQ AKRQAV NP+NTFF++KR IGRK  +    +D  K+V Y V++ +NG+  +     GK+ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCLAIMDGKTAKVIENAEGHRTTPSVVAYTDSGEILVGQAAKRQAVTNPDNTFFAIKRLIGRKYDDKAVQEDIKKKVPYAVIKADNGDAWV-ATKEGKKMAPPQVSAEVLRKM 125          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_NITMU3.356e-2852.03Chaperone protein dnaK OS=Nitrosospira multiformis... [more]
DNAK_METS43.356e-2853.66Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]
DNAK_JANMA3.356e-2852.03Chaperone protein dnaK OS=Janthinobacterium sp. (s... [more]
DNAK_FRATW3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATU3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis G... [more]
DNAK_FRATT3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATO3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATN3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATM3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATH3.356e-2852.42Chaperone protein dnaK OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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