FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SOLUE (Chaperone protein dnaK OS=Solibacter usitatus (strain Ellin6076) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38
Identity = 75/121 (61.98%), Postives = 98/121 (80.99%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+PT++ N EG RTTPSVVA+TK G+RLVGQ+AKRQA+ NPENT FS+KRF+GR+  EV++E K V Y+VVR ENG+ ++D   +GK+++  EISA +L  L
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGQPTVIANQEGNRTTPSVVAFTKSGERLVGQVAKRQAITNPENTVFSIKRFMGRRYDEVNEEMKMVPYKVVRGENGDARVD--IMGKKYSPPEISAMILTKL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK3_SYNE7 (Chaperone protein dnaK3 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK3 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.739e-38
Identity = 73/121 (60.33%), Postives = 96/121 (79.34%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            +VVGIDLGTTNS +A MEGGKP ++ NAEG RTTPSVV  +K G+RLVG++A+RQ V+NP NTF ++KRFIGR+  E+ DESK+V Y V RD  GNV++ CP + ++FA EE++A +LR L
Sbjct:    3 RVVGIDLGTTNSVIAVMEGGKPMVIANAEGVRTTPSVVGVSKTGERLVGELARRQLVLNPRNTFANIKRFIGRRYDELTDESKRVPYTVRRDPEGNVRIVCPQLSREFAPEEVAAMILRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK1_SYNP6 (Chaperone protein dnaK 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.739e-38
Identity = 73/121 (60.33%), Postives = 96/121 (79.34%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            +VVGIDLGTTNS +A MEGGKP ++ NAEG RTTPSVV  +K G+RLVG++A+RQ V+NP NTF ++KRFIGR+  E+ DESK+V Y V RD  GNV++ CP + ++FA EE++A +LR L
Sbjct:    3 RVVGIDLGTTNSVIAVMEGGKPMVIANAEGVRTTPSVVGVSKTGERLVGELARRQLVLNPRNTFANIKRFIGRRYDELTDESKRVPYTVRRDPEGNVRIVCPQLSREFAPEEVAAMILRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK3_SYNY3 (Chaperone protein dnaK3 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK3 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38
Identity = 73/121 (60.33%), Postives = 96/121 (79.34%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKP ++ NAEG RTTPSVV + K G+ +VGQ+ +RQAV+NP+NTF+ VKRF+GR+ +++  ESK+V+Y + RD+  N+K+ CP + K FA EEISA +LR L
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPIVIANAEGMRTTPSVVGFNKEGELVVGQMGRRQAVLNPQNTFYGVKRFMGRRYTDLTPESKRVAYTIRRDDRDNIKVRCPRLKKDFAPEEISAMILRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC5 (Chaperone protein dnaK OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dnaK PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33
Identity = 68/121 (56.20%), Postives = 94/121 (77.69%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+P ++ N EG RTTPSVV +TK G+RLVGQ+AKRQA+ NPENT +S+KRF+GR+ +EV+DE K V Y+ V+ +  ++ ++  A GK + A E+SA +L+ L
Sbjct:    3 KIIGIDLGTTNSVVAVMEGGEPKVIANEEGGRTTPSVVGFTKSGERLVGQVAKRQAITNPENTIYSIKRFMGRRQNEVNDEMKMVPYK-VKQQGDHIVVE--AQGKDYTAPEVSAMILQKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y+V + +NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKVEKGQNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORHD (Chaperone protein dnaK OS=Borrelia hermsii (strain DAH) GN=dnaK PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y+V + +NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKVEKGQNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y+V + +NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKVEKGQNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.720e-33
Identity = 76/123 (61.79%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDC--PAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+P ++ N EG RTTPSVVAYTK GDRLVGQIAKRQAV NPENT +S KRFIGR+  E+ +E K V Y VV   N     DC     GK  + EEI A VL  L
Sbjct:    3 KIIGIDLGTTNSCVAIMEGGEPKVLVNEEGARTTPSVVAYTKDGDRLVGQIAKRQAVTNPENTIYSAKRFIGRRFEEIQEEIKLVPYTVVAKGN-----DCAFKVQGKTASPEEIGAAVLAKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32
Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+P ++ N EG RTTPSVV +TK G+RLVGQ+AKRQA+ NPENT FS+KRF+GR+ +EV++E K V Y+V   +     +   A GK+++  EISA +L+ L
Sbjct:    3 KIIGIDLGTTNSVVAVMEGGEPKVIPNEEGGRTTPSVVGFTKTGERLVGQVAKRQAITNPENTIFSIKRFMGRRYNEVNEEMKMVPYKV---QQAGDHVAVLAQGKEYSPAEISAYILQKL 120          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SOLUE2.097e-3861.98Chaperone protein dnaK OS=Solibacter usitatus (str... [more]
DNAK3_SYNE72.739e-3860.33Chaperone protein dnaK3 OS=Synechococcus elongatus... [more]
DNAK1_SYNP62.739e-3860.33Chaperone protein dnaK 1 OS=Synechococcus sp. (str... [more]
DNAK3_SYNY36.103e-3860.33Chaperone protein dnaK3 OS=Synechocystis sp. (stra... [more]
DNAK_ACIC51.556e-3356.20Chaperone protein dnaK OS=Acidobacterium capsulatu... [more]
DNAK_BORRA4.526e-3355.37Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]
DNAK_BORHD4.526e-3355.37Chaperone protein dnaK OS=Borrelia hermsii (strain... [more]
DNAK_BORDL4.526e-3355.37Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK_BDEBA7.720e-3361.79Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
DNAK_ACIBL1.008e-3256.20Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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