FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORGA (Chaperone protein dnaK OS=Borrelia garinii GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y++ +  NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKIEKGLNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORBZ (Chaperone protein dnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y++ +  NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKIEKGLNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORBU (Chaperone protein dnaK OS=Borrelia burgdorferi GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y++ +  NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKIEKGLNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BORAP (Chaperone protein dnaK OS=Borrelia afzelii (strain PKo) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT  G+RLVGQ+AK Q V NPENT +S+KRF+GR+  EV  E K V Y++ +  NG+ +++   I KQ +  EISA  L  +
Sbjct:    3 KIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFEEVASEIKMVPYKIEKGLNGDARVNISNIKKQMSPPEISAATLTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK1_PROMM (Chaperone protein dnaK1 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            ++VGIDLGTTNS VA +E G+P ++ NAEG RTTPSVV Y+K  + LVGQ+A+RQ V+NP NTF ++KRF+GR   E+DD S  V Y V  +E GNV++ C    +++A EE+ A ++R L
Sbjct:    3 RIVGIDLGTTNSVVAVLEAGRPQVIANAEGSRTTPSVVGYSKEAELLVGQLARRQLVLNPRNTFANLKRFVGRGWDEMDDSSLSVPYTVRANEQGNVRVSCQVTEREYAPEELVASIIRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 66/122 (54.10%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  324 VVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQ--FAAEEISAXVLRSL 683
            V+GIDLGTTNS +A +EGG+P ++ N+EG RTTPS+VA+TK G+RLVGQ AKRQA+ N +NT +S+KRFIGRK SEV +E K+V Y+V+  +NG+  ++    G++  +  +EISA +L  L
Sbjct:    4 VLGIDLGTTNSCMAIVEGGQPVVLENSEGARTTPSIVAFTKSGERLVGQAAKRQAITNSKNTIYSIKRFIGRKFSEVQEEIKRVPYKVIEGKNGDCAVEVEVAGERRVYTPQEISAFILMKL 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 69/121 (57.02%), Postives = 92/121 (76.03%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K VGIDLGTTNS +A +EGGKP ++ NAEG+R TPSVVA+ + G+ LVG++AKRQAV+NPE T F +KRFIGR+  EV +E+K+V Y+VV   +G V+++    GK +  EEISA +LR L
Sbjct:    3 KAVGIDLGTTNSVIAVLEGGKPVVLENAEGERVTPSVVAF-RDGETLVGRMAKRQAVLNPEGTIFEIKRFIGRRFEEVQEEAKRVPYKVVPGPDGGVRVEVK--GKLYTPEEISAMILRKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 69/121 (57.02%), Postives = 92/121 (76.03%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K VGIDLGTTNS +A +EGGKP ++ NAEG+R TPSVVA+ + G+ LVG++AKRQAV+NPE T F +KRFIGR+  EV +E+K+V Y+VV   +G V+++    GK +  EEISA +LR L
Sbjct:    3 KAVGIDLGTTNSVIAVLEGGKPVVLENAEGERVTPSVVAF-RDGETLVGRMAKRQAVLNPEGTIFEIKRFIGRRFEEVQEEAKRVPYKVVPGPDGGVRVEVK--GKLYTPEEISAMILRKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_AKKM8 (Chaperone protein dnaK OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 69/123 (56.10%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGN--VKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A MEGG+ T++ N+EG RTTPS+VA+TK G+RLVGQ AKRQAV NP+NT FS KR IGRK SE+ +E K+V Y +V   NG+  +++D     K F+ +EI++ VL  L
Sbjct:    3 KILGIDLGTTNSCMAVMEGGQGTVLENSEGARTTPSIVAFTKSGERLVGQAAKRQAVTNPKNTVFSSKRLIGRKYSELTEEDKKVPYEIVEAPNGDAYIRVDVGGEKKTFSPQEIASMVLAKL 125          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32
Identity = 66/122 (54.10%), Postives = 89/122 (72.95%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDE-NGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPSVV +TK GDRLVGQ AKRQA+ NP+NT FS+KRF+GR+  EV +E K   Y ++ D     VK++     K ++ +EISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGSQPTVIENSEGNRTTPSVVGFTKTGDRLVGQAAKRQAITNPKNTIFSIKRFMGRRFDEVGEEKKMAPYELINDSGEARVKIN----DKVYSPQEISAMVLQKM 120          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BORGA2.246e-3254.55Chaperone protein dnaK OS=Borrelia garinii GN=dnaK... [more]
DNAK_BORBZ2.246e-3254.55Chaperone protein dnaK OS=Borrelia burgdorferi (st... [more]
DNAK_BORBU2.246e-3254.55Chaperone protein dnaK OS=Borrelia burgdorferi GN=... [more]
DNAK_BORAP2.246e-3254.55Chaperone protein dnaK OS=Borrelia afzelii (strain... [more]
DNAK1_PROMM2.246e-3252.89Chaperone protein dnaK1 OS=Prochlorococcus marinus... [more]
DNAK_METI42.934e-3254.10Chaperone protein dnaK OS=Methylacidiphilum infern... [more]
DNAK_THET85.004e-3257.02Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_THET25.004e-3257.02Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_AKKM85.004e-3256.10Chaperone protein dnaK OS=Akkermansia muciniphila ... [more]
DNAK_CHLCH8.535e-3254.10Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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