FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RICFE (Chaperone protein dnaK OS=Rickettsia felis GN=dnaK PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 59/123 (47.97%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG+RTTPS++A+    +RLVGQ AKRQAV NP NT ++VKR IGR  ++  V  +   V Y +V+ +NG+  ++  A   +++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAFAN-SERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVE--ADNNKYSPSQISAFILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RICCN (Chaperone protein dnaK OS=Rickettsia conorii GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 59/123 (47.97%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG+RTTPS++A+   G++LVGQ AKRQAV NP NT ++VKR IGR   +  V  +   V Y +V+ +NG+  ++  A   +++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFAN-GEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVE--ADNNKYSPSQISAFILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RICAE (Chaperone protein dnaK OS=Rickettsia africae (strain ESF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 59/123 (47.97%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG+RTTPS++A+   G++LVGQ AKRQAV NP NT ++VKR IGR   +  V  +   V Y +V+ +NG+  ++  A   +++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFAN-GEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVE--ADNNKYSPSQISAFILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PSEMY (Chaperone protein dnaK OS=Pseudomonas mendocina (strain ymp) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ +E G   ++ NAEG RTTPS++AY   G+ LVGQ AKRQAV NP NT ++VKR IGR+  E  V  + + V Y++V+ +N +  ++    G++ A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVSILENGNVKVLENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRRFDEDVVQKDIQMVPYKIVKADNNDAWVE--VNGQKMAPPQISAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PECCP (Chaperone protein dnaK OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G +  ++ N+EG RTTPS++AYT+ G+ LVGQ AKRQAV NP+NT F++KR IGR  K  EV  ++  + Y+++  +NG+  L+     ++ A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAIIDGTQVKVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPKNTLFAIKRLIGRRFKDEEVQRDANIMPYKIIAADNGDAWLEVK--DQKMAPPQISAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BAUCH (Chaperone protein dnaK OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 56/123 (45.53%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A +EG K  ++ N+EG RTTPS+VAYT+ G+ LVGQ AKRQ+  NP+NT F++KR IGR+    EV  +   + Y+++  +NG+  L+    G++ A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCIAIVEGTKTRVLENSEGDRTTPSIVAYTQDGEILVGQPAKRQSATNPKNTLFAIKRLIGRRFEDEEVQRDVDIMPYKIIAADNGDAWLEIK--GQKIAPPQVSAEILKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: HSP7M_PHAVU (Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 60/128 (46.88%), Postives = 82/128 (64.06%), Query Frame = 3
Query:  306 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            R     V+GIDLGTTNS V+ MEG  P ++ N+EG RTTPSVVA+ + G+ LVG  AKRQAV NP NT F  KR IGR+    +   E K V +++V+  NG+  ++  A G+Q++  +I A VL  +
Sbjct:   47 RPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWVE--ANGQQYSPSQIGAFVLTKM 172          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SILST (Chaperone protein dnaK OS=Silicibacter sp. (strain TM1040) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 60/120 (50.00%), Postives = 84/120 (70.00%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVD--DESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVL 674
            KV+GIDLGTTNS VA M+G +P ++ NAEG RTTPS+VA+T   +RLVGQ AKRQAV NP+NT F VKR IGR+  + D   + K + + V+   NG+  ++  A  ++++  +ISA +L
Sbjct:    3 KVIGIDLGTTNSCVAIMDGSQPRVIENAEGARTTPSIVAFTD-EERLVGQPAKRQAVTNPDNTIFGVKRLIGRRFDDSDLAKDKKNLPFAVINGGNGDAWVE--AKSEKYSPSQISAFIL 119          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHESR (Chaperone protein dnaK OS=Shewanella sp. (strain MR-7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 57/123 (46.34%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VGQ AKRQAV NP NTFF++KR IGR  K  EV  +   + +++++ +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGQPAKRQAVTNPNNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHESM (Chaperone protein dnaK OS=Shewanella sp. (strain MR-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 57/123 (46.34%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VGQ AKRQAV NP NTFF++KR IGR  K  EV  +   + +++++ +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGQPAKRQAVTNPNNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RICFE5.925e-2547.97Chaperone protein dnaK OS=Rickettsia felis GN=dnaK... [more]
DNAK_RICCN5.925e-2547.97Chaperone protein dnaK OS=Rickettsia conorii GN=dn... [more]
DNAK_RICAE5.925e-2547.97Chaperone protein dnaK OS=Rickettsia africae (stra... [more]
DNAK_PSEMY5.925e-2547.15Chaperone protein dnaK OS=Pseudomonas mendocina (s... [more]
DNAK_PECCP5.925e-2547.15Chaperone protein dnaK OS=Pectobacterium carotovor... [more]
DNAK_BAUCH5.925e-2545.53Chaperone protein dnaK OS=Baumannia cicadellinicol... [more]
HSP7M_PHAVU7.738e-2546.88Heat shock 70 kDa protein, mitochondrial OS=Phaseo... [more]
DNAK_SILST7.738e-2550.00Chaperone protein dnaK OS=Silicibacter sp. (strain... [more]
DNAK_SHESR7.738e-2546.34Chaperone protein dnaK OS=Shewanella sp. (strain M... [more]
DNAK_SHESM7.738e-2546.34Chaperone protein dnaK OS=Shewanella sp. (strain M... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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