FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 59/123 (47.97%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG+RTTPS++A+    +RLVGQ AKRQAV NP NT ++VKR IGR  ++  V  +   V Y +V+ +NG+  ++  A   +++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAFAN-SERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVE--ADNHKYSPSQISAFILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DESMR (Chaperone protein dnaK OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V  MEG  P  VTN EG RTTPS+VA+TK  +RLVG+IAKRQAV NPE T F++KR +GR+    EV    +   Y++V  + G+  ++    GK+++  EISA +L  L
Sbjct:    3 KIIGIDLGTTNSCVYVMEGKDPKCVTNPEGGRTTPSIVAFTK--ERLVGEIAKRQAVTNPERTIFAIKRLMGRRYDAPEVKHWLEHCPYKIVEGQGGDAYVEVE--GKKYSPAEISAIILGKL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_AGRVS (Chaperone protein dnaK OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS V+ M+G    ++ N+EG RTTPS+VA++  G+RLVGQ AKRQAV NP NT F+VKR IGR+  +  V+ +   V + +++ +NG+  ++  A GK ++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVSVMDGKDAKVIENSEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKGLVPFPIIKGDNGDAWVE--AQGKGYSPAQISAMILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_AERHH (Chaperone protein dnaK OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G    ++ NAEG RTTPS++AY   G+ LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + + + Y + + +NG+  ++    GK+ A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAILDGDHARVIENAEGDRTTPSIIAYADDGEILVGQPAKRQAITNPKNTLFAIKRLIGRRFEDDEVQRDLEIMPYAIAKADNGDAWVEVK--GKKMAPPQISAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: HSP7F_CAEEL (Heat shock 70 kDa protein F, mitochondrial OS=Caenorhabditis elegans GN=hsp-6 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 61/122 (50.00%), Postives = 81/122 (66.39%), Query Frame = 3
Query:  324 VVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            V+GIDLGTTNS V+ MEG  P ++ NAEG RTTPS VA+T  G+RLVG  AKRQAV N  NT F+ KR IGR+    EV  + K V Y++V+  NG+  ++  A GK ++  ++ A VL  +
Sbjct:   33 VIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVE--AQGKVYSPSQVGAFVLMKM 152          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RALSO (Chaperone protein dnaK OS=Ralstonia solanacearum GN=dnaK PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ MEG  P ++ NAEG RTTPS++AY + G+ LVG  AKRQAV NP NT ++VKR IGRK    EV  +   + Y + + +NG+  ++     K+ A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVSIMEGNTPKVIENAEGARTTPSIIAYMEDGEILVGAPAKRQAVTNPRNTLYAVKRLIGRKFEEKEVQKDIGLMPYTISKADNGDAWVE--VRDKKMAPPQISAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DICNV (Chaperone protein dnaK OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGN--VKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G    ++ N+EG RTTPS++A++  G+ LVGQ AKRQAV NP+NT +++KR IGR+    EV  +   V Y +V+ +NG+  V++D    GK+ A  EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDSAKVIENSEGTRTTPSIIAFSD-GEVLVGQPAKRQAVTNPKNTLYAIKRLIGRRFDEKEVQKDINLVPYNIVKSDNGDAWVEID----GKKMAPPEISARILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHESA (Chaperone protein dnaK OS=Shewanella sp. (strain ANA-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 57/123 (46.34%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VGQ AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGQPAKRQAVTNPNNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEON (Chaperone protein dnaK OS=Shewanella oneidensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 57/123 (46.34%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VGQ AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGQPAKRQAVTNPNNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVL 674
            KV+GIDLGTTNS +A M+G +P +V NAEG RTTPS+VA+T   +RLVGQ AKRQAV NP+NT F VKR IGR+  +  +  + K + + V+   NG+  ++  A G++++  +ISA +L
Sbjct:    3 KVIGIDLGTTNSCIAIMDGSQPRVVENAEGARTTPSIVAFTD-DERLVGQPAKRQAVTNPDNTIFGVKRLIGRRNDDAALAKDKKNLPFAVIDGGNGDAWVE--AKGEKYSPSQISAFIL 119          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RICPR7.738e-2547.97Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_DESMR7.738e-2550.41Chaperone protein dnaK OS=Desulfovibrio magneticus... [more]
DNAK_AGRVS7.738e-2547.15Chaperone protein dnaK OS=Agrobacterium vitis (str... [more]
DNAK_AERHH7.738e-2546.34Chaperone protein dnaK OS=Aeromonas hydrophila sub... [more]
HSP7F_CAEEL1.011e-2450.00Heat shock 70 kDa protein F, mitochondrial OS=Caen... [more]
DNAK_RALSO1.011e-2448.78Chaperone protein dnaK OS=Ralstonia solanacearum G... [more]
DNAK_DICNV1.011e-2448.00Chaperone protein dnaK OS=Dichelobacter nodosus (s... [more]
DNAK_SHESA1.320e-2446.34Chaperone protein dnaK OS=Shewanella sp. (strain A... [more]
DNAK_SHEON1.320e-2446.34Chaperone protein dnaK OS=Shewanella oneidensis GN... [more]
DNAK_ROSDO1.320e-2450.00Chaperone protein dnaK OS=Roseobacter denitrifican... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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