FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PSYWF (Chaperone protein dnaK OS=Psychrobacter sp. (strain PRwf-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 60/123 (48.78%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K +GIDLGTTNS VA MEG K  ++ NAEG RTTPS++AY K G+ LVGQ AKRQAV NP NT +++KR IGR+  +  V  +   V Y++V+ +NG+  ++     K+ A  +ISA +L+ +
Sbjct:    3 KTIGIDLGTTNSCVAVMEGDKVKVIENAEGTRTTPSIIAY-KDGEILVGQSAKRQAVTNPNNTLYAIKRLIGRRFDDKVVQKDIGMVPYKIVKADNGDAWVE--VNDKKMAPPQISAEILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PHOLL (Chaperone protein dnaK OS=Photorhabdus luminescens subsp. laumondii GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 57/125 (45.60%), Postives = 88/125 (70.40%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQ----VSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G    ++ N+EG RTTPS++AYT+ G+ LVGQ AKRQAV NP+NT F++KR IGR+    D+E+++    + Y+++  +NG+  L+     ++ A  ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAIMDGTTARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQ--DEEAQRDVAIMPYKIIAADNGDAWLEVK--DQKMAPPQVSAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_MEGEL (Chaperone protein dnaK (Fragment) OS=Megasphaera elsdenii GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 62/121 (51.24%), Postives = 78/121 (64.46%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+PT++TN EG R TPSVV ++K G+RLVGQ+AKRQAV NPENT  S+KR +G        ES  V  +                GK++  +EISA +L+ L
Sbjct:    3 KVIGIDLGTTNSVVAVMEGGEPTVITNTEGSRLTPSVVGFSKTGERLVGQLAKRQAVSNPENTISSIKRHMG--------ESYTVDIQ----------------GKKYTPQEISAMILQKL 99          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HYPNA (Chaperone protein dnaK OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEGG+  ++ NAEG RTTPSVVA+T+ GDRL+GQ A+RQ V NP+ TF+++KR IGR   +     +     + +V+  NG+  +      K ++ +EISA +L  +
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGQAKVIENAEGARTTPSVVAFTENGDRLIGQPARRQGVTNPDFTFYAIKRLIGRTFDDPTAQKDKAMSPFSIVKAPNGDAWV--KGRDKDYSPQEISAFILTKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIN (Chaperone protein dnaK OS=Haemophilus influenzae GN=dnaK PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + K + + + R +NG+  ++    G + A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTD-NETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVK--GDKLAPPQISAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIG (Chaperone protein dnaK OS=Haemophilus influenzae (strain PittGG) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + K + + + R +NG+  ++    G + A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTD-NETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVK--GDKLAPPQISAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIE (Chaperone protein dnaK OS=Haemophilus influenzae (strain PittEE) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + K + + + R +NG+  ++    G + A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTD-NETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVK--GDKLAPPQISAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HAEI8 (Chaperone protein dnaK OS=Haemophilus influenzae (strain 86-028NP) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + K + + + R +NG+  ++    G + A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTD-NETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVK--GDKLAPPQISAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACTPJ (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + K + + + R +NG+  ++    G + A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTD-NETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVK--GDKLAPPQISAEVLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACTP7 (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+    EV  + K + + + R +NG+  ++    G + A  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTD-NETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVK--GDKLAPPQISAEVLKKM 122          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSYWF1.320e-2448.78Chaperone protein dnaK OS=Psychrobacter sp. (strai... [more]
DNAK_PHOLL1.320e-2445.60Chaperone protein dnaK OS=Photorhabdus luminescens... [more]
DNAK_MEGEL1.320e-2451.24Chaperone protein dnaK (Fragment) OS=Megasphaera e... [more]
DNAK_HYPNA1.320e-2446.34Chaperone protein dnaK OS=Hyphomonas neptunium (st... [more]
DNAK_HAEIN1.320e-2447.97Chaperone protein dnaK OS=Haemophilus influenzae G... [more]
DNAK_HAEIG1.320e-2447.97Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_HAEIE1.320e-2447.97Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_HAEI81.320e-2447.97Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_ACTPJ1.320e-2447.97Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]
DNAK_ACTP71.320e-2447.97Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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