FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DESVH (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24
Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRK--MSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V  MEG  P  +TN EG RTTPSVVA+T   +RLVG IAKRQAV NPE T F+VKR +GR+    EV    +   YR+V   NG+  ++    G+ ++A EISA +L  L
Sbjct:    3 KIIGIDLGTTNSCVYVMEGKDPKCITNPEGGRTTPSVVAFTD-KERLVGDIAKRQAVTNPERTVFAVKRLMGRRGDAPEVGRWKEHSPYRIVAGANGDAAVEVQ--GRPYSAPEISAMILGKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CHRVO (Chaperone protein dnaK OS=Chromobacterium violaceum GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA +EGG P ++ NAEG RTTPS++AY + G+ LVG  AKRQAV NP+NT ++ KR IGR+    EV  +   + + +++ +NG+  +      ++ A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAVVEGGNPKVIENAEGNRTTPSIIAYVEDGEILVGAPAKRQAVTNPKNTIYAAKRLIGRRFEDKEVQKDIDLMPFEILKAKNGDAWV--KVRDQELAPPQISAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACIAD (Chaperone protein dnaK OS=Acinetobacter sp. (strain ADP1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24
Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA +EG K  ++ NAEG RTTPS+VAY K  + LVGQ AKRQAV NP+NT F++KR IGR+  +  V  +   V Y++++ +NG+  ++     K+ A +++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLEGDKVKVIENAEGTRTTPSIVAY-KDSEILVGQSAKRQAVTNPKNTLFAIKRLIGRRYEDQAVQKDIGLVPYKIIKADNGDAWVE--VNDKKLAPQQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEHH (Chaperone protein dnaK OS=Shewanella halifaxensis (strain HAW-EB4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            +++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + LVGQ AKRQAV NP NT +++KR IGR  K  EV  +   + ++++  +NG+  ++  A GK+ A  +ISA +L+ +
Sbjct:    3 RIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYT-ADETLVGQSAKRQAVTNPTNTVYAIKRLIGRRFKDDEVQRDVDIMPFKIISADNGDAWVE--AQGKKMAPPQISAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RALEH (Chaperone protein dnaK OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA +EG  P ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP NT ++VKR IGRK    EV  +   + Y +V+ +NG+  +      ++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAILEGNTPKVIENSEGARTTPSIIAYMEDGEILVGAPAKRQAVTNPRNTLYAVKRLIGRKFEEKEVQKDIGLMPYSIVKADNGDAWVS--VRDQKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PROMH (Chaperone protein dnaK OS=Proteus mirabilis (strain HI4320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 56/123 (45.53%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G    ++ N EG RTTPS+VAY + G+ LVGQ AKRQAV N +NT F++KR IGR+   +EV  +   + Y++++ +NG+  ++  A  ++ A  ++SA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGKNARVIENGEGDRTTPSIVAYAQDGEILVGQPAKRQAVTNSQNTLFAIKRLIGRRFEDAEVQRDVSIMPYKIIKADNGDAWVE--ARNEKMAPPQVSAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DIAST (Chaperone protein dnaK OS=Diaphorobacter sp. (strain TPSY) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG    ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP+NT ++ KR IGRK    EV  +   + + + R +NG+  ++    G++ A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNNTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPKNTIYAAKRLIGRKFEEKEVQKDIDLMPFTITRADNGDAWVE--VRGQKLAPPQISAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CUPTR (Chaperone protein dnaK OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA +EG  P ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP NT ++VKR IGRK    EV  +   + Y +V+ +NG+  +      ++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAILEGNTPKVIENSEGARTTPSIIAYMEDGEILVGAPAKRQAVTNPRNTLYAVKRLIGRKFEEKEVQKDIGLMPYSIVKADNGDAWVS--VRDQKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURP8 (Chaperone protein dnaK OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT ++VKR IGR+    EV  +   + Y++V+ +NG+  ++  A G + A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVALMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLYAVKRLIGRRFEEKEVQKDIGLMPYKIVKHDNGDAWVE--AHGNKLAPSQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACISJ (Chaperone protein dnaK OS=Acidovorax sp. (strain JS42) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG    ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP+NT ++ KR IGRK    EV  +   + + + R +NG+  ++    G++ A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNNTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPKNTIYAAKRLIGRKFDEKEVQKDIDLMPFTITRADNGDAWVE--VRGQKLAPPQISAEVLRKM 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_DESVH2.251e-2452.03Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]
DNAK_CHRVO2.251e-2446.34Chaperone protein dnaK OS=Chromobacterium violaceu... [more]
DNAK_ACIAD2.251e-2447.15Chaperone protein dnaK OS=Acinetobacter sp. (strai... [more]
DNAK_SHEHH2.940e-2447.15Chaperone protein dnaK OS=Shewanella halifaxensis ... [more]
DNAK_RALEH2.940e-2447.15Chaperone protein dnaK OS=Ralstonia eutropha (stra... [more]
DNAK_PROMH2.940e-2445.53Chaperone protein dnaK OS=Proteus mirabilis (strai... [more]
DNAK_DIAST2.940e-2447.15Chaperone protein dnaK OS=Diaphorobacter sp. (stra... [more]
DNAK_CUPTR2.940e-2447.15Chaperone protein dnaK OS=Cupriavidus taiwanensis ... [more]
DNAK_BURP82.940e-2446.34Chaperone protein dnaK OS=Burkholderia phymatum (s... [more]
DNAK_ACISJ2.940e-2447.15Chaperone protein dnaK OS=Acidovorax sp. (strain J... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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