FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: HSP71_TRYCR (Heat shock 70 kDa protein, mitochondrial OS=Trypanosoma cruzi GN=MTP70 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  312 VNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            V   V+GIDLGTT S VA MEG KP ++ N EG R TPSVVA+ K  ++LVG  AKRQAV NP++TFF+VKR IGR+   S +  + K V Y++ R  NG+  +   A GKQ++  ++ A VL  +
Sbjct:   25 VTGDVIGIDLGTTYSCVAVMEGDKPRVLENTEGFRATPSVVAF-KGQEKLVGLAAKRQAVTNPQSTFFAVKRLIGRRFEDSNIQHDIKNVPYKIGRSSNGDAWVQ-DANGKQYSPSQVGAFVLEKM 148          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHESW (Chaperone protein dnaK OS=Shewanella sp. (strain W3-18-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 56/123 (45.53%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VG  AKRQAV NP NTFF++KR IGR  K  EV  +   + +++++ +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGSPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPC (Chaperone protein dnaK OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 56/123 (45.53%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VG  AKRQAV NP NTFF++KR IGR  K  EV  +   + +++++ +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGSPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 55/123 (44.72%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            +++GIDLGTTNS VA ++G K  ++ NAEG RTTPS++AY++ G+ LVGQ AKRQA+ NP+NT F++KR IGR+    EV  +   + + +++ +NG+  +   A  ++ A  +ISA VL+ +
Sbjct:    3 RIIGIDLGTTNSCVAVLDGEKAKVIENAEGDRTTPSIIAYSQDGETLVGQPAKRQAITNPKNTLFAIKRLIGRRFEDKEVQRDIDIMPFDIIKADNGDAWVQ--AKDEKLAPPQISAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGN--VKLDCPAIGKQFAAEEISAXVLRSL 683
            K +GIDLGTTNS VA ++GGK  ++ N EG RTTPSVVA+T  G+ LVG  AKRQAV NP  T F++KR IGR+    EV  +   + Y++V+ +NG+  V++D    G + A  +ISA VL+ +
Sbjct:    3 KTIGIDLGTTNSCVAVLDGGKARVIENGEGDRTTPSVVAFTDDGEILVGSPAKRQAVTNPNKTLFAIKRLIGRRFQDEEVQRDIGIMPYKIVKADNGDAWVEID----GDKKAPPQISAEVLKKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURVG (Chaperone protein dnaK OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQISAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURS3 (Chaperone protein dnaK OS=Burkholderia sp. (strain 383) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +V+ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYTIVKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURM1 (Chaperone protein dnaK OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAVMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIKADNGDAWVE--AHGQKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ACIAC (Chaperone protein dnaK OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24
Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG    ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP+NT ++ KR IGRK    EV  +   + Y + + +NG+  ++    G + A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNTTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPKNTIYAAKRLIGRKFEEKEVQKDIDLMPYTIAKADNGDAWVE--VRGNKLAPPQISAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THEP3 (Chaperone protein dnaK OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTT S VA MEGG+P ++ NAEG RTTPSVVA+TK G+RLVGQ+AKRQA+VNP+ T  S+KR +G              Y+V  D+            K++  +EISA +L+ L
Sbjct:    3 KVIGIDLGTTFSCVAVMEGGQPVVIPNAEGARTTPSVVAFTKEGERLVGQVAKRQAIVNPDRTIMSIKRHMG------------TDYKVKIDD------------KEYTPQEISAMILQKL 99          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_TRYCR3.840e-2449.21Heat shock 70 kDa protein, mitochondrial OS=Trypan... [more]
DNAK_SHESW3.840e-2445.53Chaperone protein dnaK OS=Shewanella sp. (strain W... [more]
DNAK_SHEPC3.840e-2445.53Chaperone protein dnaK OS=Shewanella putrefaciens ... [more]
DNAK_PSEA63.840e-2444.72Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_IDILO3.840e-2448.80Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]
DNAK_BURVG3.840e-2447.15Chaperone protein dnaK OS=Burkholderia vietnamiens... [more]
DNAK_BURS33.840e-2447.15Chaperone protein dnaK OS=Burkholderia sp. (strain... [more]
DNAK_BURM13.840e-2446.34Chaperone protein dnaK OS=Burkholderia multivorans... [more]
DNAK_ACIAC3.840e-2447.15Chaperone protein dnaK OS=Acidovorax avenae subsp.... [more]
DNAK_THEP35.016e-2449.59Chaperone protein dnaK OS=Thermoanaerobacter pseud... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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