FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHESH (Chaperone protein dnaK OS=Shewanella sediminis (strain HAW-EB3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G  P ++ NAEG RTTPS++AYT   + LVGQ AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  A GK+ A  ++SA  L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDTPRVLENAEGDRTTPSIIAYTG-EEILVGQPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIGADNGDAWVE--AHGKKMAPPQVSAETLKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RICPU (Chaperone protein dnaK OS=Rickettsia peacockii (strain Rustic) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +P ++ NAEG+RTTPS++A+   G++LVGQ AKRQAV N  NT ++VKR IGR   +  V  +   V Y +V+ +NG+  ++  A   +++  +ISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFAN-GEKLVGQSAKRQAVTNHRNTIYAVKRLIGRNFIDPMVKKDQGIVPYNIVKADNGDAWVE--ADNNKYSPSQISAFILQKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PASHA (Chaperone protein dnaK OS=Pasteurella haemolytica GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G KP ++ NAEG RTTPS++AYT   + LVGQ AKRQA+ NP+NT F++KR IGR+   +EV  + + + + + + +NG+  +     G + A  +ISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTD-KETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWVTVK--GDKLAPPQISAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURTA (Chaperone protein dnaK OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURPS (Chaperone protein dnaK OS=Burkholderia pseudomallei GN=dnaK PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURP6 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 668) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURP1 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 1710b) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURP0 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 1106a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURMS (Chaperone protein dnaK OS=Burkholderia mallei (strain SAVP1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURMA (Chaperone protein dnaK OS=Burkholderia mallei GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SHESH5.016e-2447.97Chaperone protein dnaK OS=Shewanella sediminis (st... [more]
DNAK_RICPU5.016e-2447.15Chaperone protein dnaK OS=Rickettsia peacockii (st... [more]
DNAK_PASHA5.016e-2446.34Chaperone protein dnaK OS=Pasteurella haemolytica ... [more]
DNAK_BURTA5.016e-2446.34Chaperone protein dnaK OS=Burkholderia thailandens... [more]
DNAK_BURPS5.016e-2446.34Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP65.016e-2446.34Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP15.016e-2446.34Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP05.016e-2446.34Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURMS5.016e-2446.34Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURMA5.016e-2446.34Chaperone protein dnaK OS=Burkholderia mallei GN=d... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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