FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURM9 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10229) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURM7 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10247) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURCJ (Chaperone protein dnaK OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURCH (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain HI2424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURCC (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURCA (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP+NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THEPX (Chaperone protein dnaK OS=Thermoanaerobacter sp. (strain X514) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTT S VA MEGG+P ++ NAEG RTTPSVVA+TK G+RLVGQ+AKRQA+VNP+ T  S+KR +G              Y+V  D+            K++  +EISA +L+ L
Sbjct:    3 KVIGIDLGTTFSCVAVMEGGQPVVIPNAEGARTTPSVVAFTKEGERLVGQVAKRQAIVNPDRTIMSIKRHMGS------------DYKVKIDD------------KEYTPQEISAMILQKL 99          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHELP (Chaperone protein dnaK OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQAV NP+NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  A  K+ A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYTG-EEVLVGQPAKRQAVTNPKNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWVE--AHDKKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS+VAYT   + +VGQ AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++    G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIVAYTD-EEIIVGQPAKRQAVTNPNNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIGADNGDAWVE--QRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB9 (Chaperone protein dnaK OS=Shewanella baltica (strain OS195) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 56/123 (45.53%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VG  AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGSPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BURM95.016e-2446.34Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURM75.016e-2446.34Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURCJ5.016e-2446.34Chaperone protein dnaK OS=Burkholderia cepacia (st... [more]
DNAK_BURCH5.016e-2446.34Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCC5.016e-2446.34Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCA5.016e-2446.34Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_THEPX6.550e-2449.59Chaperone protein dnaK OS=Thermoanaerobacter sp. (... [more]
DNAK_SHELP6.550e-2447.15Chaperone protein dnaK OS=Shewanella loihica (stra... [more]
DNAK_SHEDO6.550e-2447.15Chaperone protein dnaK OS=Shewanella denitrificans... [more]
DNAK_SHEB96.550e-2445.53Chaperone protein dnaK OS=Shewanella baltica (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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