FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB8 (Chaperone protein dnaK OS=Shewanella baltica (strain OS185) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 56/123 (45.53%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VG  AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGSPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB5 (Chaperone protein dnaK OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 56/123 (45.53%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VG  AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGSPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB2 (Chaperone protein dnaK OS=Shewanella baltica (strain OS223) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 56/123 (45.53%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ++GGK  ++ NAEG RTTPS++AYT   + +VG  AKRQAV NP NTFF++KR IGR  K  EV  +   + ++++  +NG+  ++  + G + A  ++SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTD-DETIVGSPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVE--SRGNKMAPPQVSAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DESAD (Chaperone protein dnaK OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 61/123 (49.59%), Postives = 83/123 (67.48%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V  MEG  P  VTNAEG RTTPS+V +T   +RLVG+IAKRQAV NPE T F++KR +GR+ S  EV   +    Y +V  + G+  ++    GK+++  E+SA +L+ L
Sbjct:    3 KIIGIDLGTTNSCVYVMEGKDPKCVTNAEGGRTTPSIVGFTD-KERLVGEIAKRQAVTNPEKTVFAIKRLMGRQASSPEVKKWADHCPYPIVDGKGGDAWVEIE--GKKYSPSEVSAIILQQL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DELAS (Chaperone protein dnaK OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G    ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP NT ++ KR IGRK    EV  +   + Y + R +NG+  ++    G++ A  +ISA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMDGNTTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPRNTIYAAKRLIGRKFDEKEVQKDIDLMPYTISRADNGDAWVE--VRGQKLAPPQISAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CLOTH (Chaperone protein dnaK OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR-KMSEVDDES 566
            KV+GIDLGTTNS VA MEGG+P ++ N+EG RTTPSVVA+TK  +RLVGQ+AKRQA+ NPE T  S+KR +G  K  ++DD+S
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEPVVIPNSEGSRTTPSVVAFTKNNERLVGQVAKRQAITNPERTIISIKRDMGTDKRVKIDDKS 85          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CLONN (Chaperone protein dnaK OS=Clostridium novyi (strain NT) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ MEGG P ++ NAEG RTTPSVVA+ + G+RLVGQ+AKRQA+ NP+ T  S+KR +G              YRV  D            GK ++ EEISA +L+ L
Sbjct:    3 KIIGIDLGTTNSCVSVMEGGNPVVIPNAEGSRTTPSVVAFKEDGERLVGQVAKRQAITNPDKTIISIKRHMG------------TDYRVNVD------------GKDYSPEEISAMILQKL 99          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURCM (Chaperone protein dnaK OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPRNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_BURA4 (Chaperone protein dnaK OS=Burkholderia ambifaria (strain MC40-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG +  ++ N+EG RTTPS++AY    + LVG  AKRQ+V NP NT F+VKR IGR+    EV  +   + Y +++ +NG+  ++  A G++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPRNTLFAVKRLIGRRFEEKEVQKDIGLMPYAIIKADNGDAWVE--AHGEKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ARCB4 (Chaperone protein dnaK OS=Arcobacter butzleri (strain RM4018) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQ--VSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA  E G+  I+ N EG+ TTPS+VAYT  G+ LVG  AKRQA+ NPE T +S+KR +G  M+E + +  Q  V Y++V D NG   ++    GK +  +EISA +L  L
Sbjct:    3 KVIGIDLGTTNSCVAVYENGEAKIIPNKEGKNTTPSIVAYTDKGEVLVGDPAKRQAITNPEKTIYSIKRIMGLMMNEPNAKEAQSKVGYKIV-DRNGAAAVE--IAGKVYTPQEISAKILGKL 122          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SHEB86.550e-2445.53Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB56.550e-2445.53Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB26.550e-2445.53Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_DESAD6.550e-2449.59Chaperone protein dnaK OS=Desulfovibrio salexigens... [more]
DNAK_DELAS6.550e-2447.15Chaperone protein dnaK OS=Delftia acidovorans (str... [more]
DNAK_CLOTH6.550e-2463.86Chaperone protein dnaK OS=Clostridium thermocellum... [more]
DNAK_CLONN6.550e-2448.76Chaperone protein dnaK OS=Clostridium novyi (strai... [more]
DNAK_BURCM6.550e-2446.34Chaperone protein dnaK OS=Burkholderia ambifaria (... [more]
DNAK_BURA46.550e-2446.34Chaperone protein dnaK OS=Burkholderia ambifaria (... [more]
DNAK_ARCB46.550e-2449.59Chaperone protein dnaK OS=Arcobacter butzleri (str... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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