FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPW (Chaperone protein dnaK OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            +++GIDLGTTNS VA ++G K  ++ NAEG RTTPS++AYT   + LVGQ AKRQAV NP NT F++KR IGR  K  EV  +   + ++++  +NG+  ++  A GK+ A  +ISA +L+ +
Sbjct:    3 RIIGIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYT-ADETLVGQPAKRQAVTNPTNTVFAIKRLIGRRFKDDEVQRDVDIMPFKIIGADNGDAWVE--AQGKKMAPPQISAEILKKM 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RALME (Chaperone protein dnaK OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaK PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ +EG  P ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP NT ++VKR IGRK    EV  +   + Y +V+ +NG+  +      ++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVSILEGNTPKVIENSEGARTTPSIIAYMEDGEILVGAPAKRQAVTNPRNTLYAVKRLIGRKFEEKEVQKDIGLMPYAIVKADNGDAWVG--VRDQKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RALEJ (Chaperone protein dnaK OS=Ralstonia eutropha (strain JMP134) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ +EG  P ++ N+EG RTTPS++AY + G+ LVG  AKRQAV NP NT ++VKR IGRK    EV  +   + Y +V+ +NG+  +      ++ A  ++SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVSILEGNTPKVIENSEGTRTTPSIIAYMEDGEILVGAPAKRQAVTNPRNTLYAVKRLIGRKFEEKEVQKDIGLMPYSIVKADNGDAWVG--VRDQKLAPPQVSAEVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_POLSQ (Chaperone protein dnaK OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 55/123 (44.72%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ +E   P +V NAEG RTTPS++AY + G+ LVG  AKRQ+V NP+NT ++VKR +GRK +  EV  +   + Y ++  +NG+  ++  A  ++ A +++SA +LR +
Sbjct:    3 KIIGIDLGTTNSCVSVVENNAPKVVENAEGGRTTPSIIAYVEDGEVLVGAPAKRQSVTNPKNTIYAVKRLMGRKFTDPEVQKDIGLMPYSIIAADNGDAWVE--ARDRKMAPQQVSAEILRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 55/121 (45.45%), Postives = 81/121 (66.94%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            + +GIDLGTTNS VA M+G    ++ N EG RTTPS+VA+T  G+RL+G  AKRQA  N  NTFF+ KR IGR+ S+ + ++  V Y+V   +NG+  +     GK+++  +I A +L++L
Sbjct:    3 RAIGIDLGTTNSCVAIMQGKDAKVIENKEGARTTPSIVAFTSSGERLIGAPAKRQATTNANNTFFATKRLIGRQYSDPEMKNLGVPYKVFAAKNGDAWVK-TTDGKEYSPSQIGAFILQNL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HELPY (Chaperone protein dnaK OS=Helicobacter pylori GN=dnaK PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNSA+A  EG +  I+ N EG+ TTPS+VA+T  G+ LVG+ AKRQAV NPE T +S+KR +G   +E    +  K++ Y++V D NG   ++    GK +  +EISA +L  L
Sbjct:    3 KVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIV-DRNGACAIEIS--GKVYTPQEISAKILMKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HELPS (Chaperone protein dnaK OS=Helicobacter pylori (strain Shi470) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNSA+A  EG +  I+ N EG+ TTPS+VA+T  G+ LVG+ AKRQAV NPE T +S+KR +G   +E    +  K++ Y++V D NG   ++    GK +  +EISA +L  L
Sbjct:    3 KVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIV-DRNGACAIEIS--GKVYTPQEISAKILMKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HELPH (Chaperone protein dnaK OS=Helicobacter pylori (strain HPAG1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNSA+A  EG +  I+ N EG+ TTPS+VA+T  G+ LVG+ AKRQAV NPE T +S+KR +G   +E    +  K++ Y++V D NG   ++    GK +  +EISA +L  L
Sbjct:    3 KVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIV-DRNGACAIEIS--GKVYTPQEISAKILMKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HELPG (Chaperone protein dnaK OS=Helicobacter pylori (strain G27) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNSA+A  EG +  I+ N EG+ TTPS+VA+T  G+ LVG+ AKRQAV NPE T +S+KR +G   +E    +  K++ Y++V D NG   ++    GK +  +EISA +L  L
Sbjct:    3 KVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIV-DRNGACAIEIS--GKVYTPQEISAKILMKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_HELP2 (Chaperone protein dnaK OS=Helicobacter pylori (strain P12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNSA+A  EG +  I+ N EG+ TTPS+VA+T  G+ LVG+ AKRQAV NPE T +S+KR +G   +E    +  K++ Y++V D NG   ++    GK +  +EISA +L  L
Sbjct:    3 KVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIV-DRNGACAIEIS--GKVYTPQEISAKILMKL 122          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SHEPW8.555e-2447.15Chaperone protein dnaK OS=Shewanella piezotolerans... [more]
DNAK_RALME8.555e-2446.34Chaperone protein dnaK OS=Ralstonia metallidurans ... [more]
DNAK_RALEJ8.555e-2446.34Chaperone protein dnaK OS=Ralstonia eutropha (stra... [more]
DNAK_POLSQ8.555e-2444.72Chaperone protein dnaK OS=Polynucleobacter sp. (st... [more]
DNAK_WOLPP1.117e-2345.45Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_HELPY1.117e-2347.97Chaperone protein dnaK OS=Helicobacter pylori GN=d... [more]
DNAK_HELPS1.117e-2347.97Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELPH1.117e-2347.97Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELPG1.117e-2347.97Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELP21.117e-2347.97Chaperone protein dnaK OS=Helicobacter pylori (str... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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