FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_STRAW (Chaperone protein dnaK2 OS=Streptomyces avermitilis GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32
Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K VGIDLGTTNS +A  EGG+P++V N+EG RTTPSVVA+T  G+RLVGQ+A+RQA++NP+ T +S KRFIGR   E+ DE++ V+Y VV  + G  +       K +A EEISA VLR L
Sbjct:    3 KAVGIDLGTTNSVIAVWEGGEPSVVPNSEGNRTTPSVVAFTDTGERLVGQLARRQAILNPKGTIYSAKRFIGRHFDEISDEARAVTYDVVEGDGGAARF--KVRDKLYAPEEISAQVLRKL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PELLD (Chaperone protein dnaK OS=Pelodictyon luteolum (strain DSM 273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.115e-31
Identity = 67/121 (55.37%), Postives = 90/121 (74.38%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA+TK GDRLVGQ AKRQA+ NP+NT FS+KRFIGRK  EV +E K   Y VV +E G  ++      K ++ +E+SA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKTGDRLVGQAAKRQAITNPKNTIFSIKRFIGRKFDEVPNEKKIAPYEVV-NEGGEARVKIN--DKTYSPQEVSAMILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTE (Chaperone protein dnaK OS=Chlorobium tepidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.115e-31
Identity = 71/122 (58.20%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIG-KQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA+TK G+RLVGQ AKRQAV NP+NT FS+KRF+GRK  EV +E K  SY VV +E G  K+    IG K ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGSRTTPSMVAFTKTGERLVGQAAKRQAVTNPKNTIFSIKRFMGRKYDEVPNEKKLASYDVV-NEGGYAKV---KIGDKTYSPQEISAMILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_NITOC (Chaperone protein dnaK OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.456e-31
Identity = 68/123 (55.28%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG KP ++ NAEG RTTPSVVA+TK G+ LVGQ AKRQA+ NP+NT +++KR IGR+  E  V  + K V Y++V+ +NG+  ++  A GK+ A  E+SA VLR +
Sbjct:    3 KIIGIDLGTTNSCVALMEGNKPRVIENAEGDRTTPSVVAFTKEGETLVGQSAKRQAITNPQNTLYAIKRLIGRRFDEEVVQRDIKMVPYKIVKADNGDAWVE--ATGKKMAPPEVSANVLRKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBP (Chaperone protein dnaK OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 3
Query:  318 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            EK++GIDLGTTNS VA MEGG P ++ N+EG RTTPS+VA+T  G+ +VGQ AK QA+ N  NT  S KRFIGR+ +E  DESK VSY+V+R  N  VK +   +  +F  +EI+A VL+ +
Sbjct:    4 EKIIGIDLGTTNSCVAVMEGGDPVVIQNSEGARTTPSIVAFTAKGETIVGQFAKNQAITNAVNTIRSAKRFIGRRFNEAGDESKMVSYKVIRAGNDGVKFE--TVSGEFTPQEIAARVLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBA (Chaperone protein dnaK OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 3
Query:  318 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            EK++GIDLGTTNS VA MEGG P ++ N+EG RTTPS+VA+T  G+ +VGQ AK QA+ N  NT  S KRFIGR+ +E  DESK VSY+V+R  N  VK +   +  +F  +EI+A VL+ +
Sbjct:    4 EKIIGIDLGTTNSCVAVMEGGDPVVIQNSEGARTTPSIVAFTAKGETIVGQFAKNQAITNAVNTIRSAKRFIGRRFNEAGDESKMVSYKVIRAGNDGVKFE--TVSGEFTPQEIAARVLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CHLP8 (Chaperone protein dnaK OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 69/122 (56.56%), Postives = 94/122 (77.05%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIG-KQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA+TK G+RL+GQ AKRQAV NP+NT FS+KRF+GRK  EV +E K  SY VV +E G+ ++    IG K ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGYRTTPSMVAFTKTGERLIGQAAKRQAVTNPKNTIFSIKRFMGRKYDEVPNEKKFASYDVV-NEGGDARV---KIGEKSYSPQEISAMILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_APHHA (Chaperone protein dnaK OS=Aphanothece halophytica GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.483e-31
Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS  A +EGGKP ++ N EG RTTPS+VA+TK  +RLVGQ+AKRQAV N ENT +S+KRFIGR+  + + E  +VSY  V   +  V + C   GKQ+  +E+SA +L++L
Sbjct:    3 KVIGIDLGTTNSCFAVLEGGKPLVIENVEGGRTTPSIVAFTKEKERLVGQLAKRQAVTNAENTIYSIKRFIGRRWEDTEQERNRVSYHCVPGRDKTVDVKC--WGKQYTPQELSAMILQTL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.243e-31
Identity = 66/123 (53.66%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K +GIDLGTTNS VA + GG+P ++ N EGQRTTPSVVA+T  G+RLVGQ+AKRQA+ NPENT FS+KR +GRK +  EV +  K++ Y++V   NG+  ++   +GK+++  EISA +L+ L
Sbjct:    3 KAIGIDLGTTNSVVAVVVGGEPVVIPNQEGQRTTPSVVAFTDKGERLVGQVAKRQAITNPENTIFSIKRLMGRKYNSQEVQEAKKRLPYKIVEAPNGDAHVE--IMGKRYSPPEISAMILQKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PROVI (Chaperone protein dnaK OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.236e-31
Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA+TK GDRLVGQ AKRQA+ NP NT FS+KRF+GRK  EV +E K   Y VV +E G  ++      K ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKNGDRLVGQAAKRQAITNPTNTIFSIKRFVGRKFDEVPNEKKIAPYAVV-NEGGEARVKIN--DKTYSPQEISAMILQKM 120          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK2_STRAW8.535e-3256.20Chaperone protein dnaK2 OS=Streptomyces avermitili... [more]
DNAK_PELLD1.115e-3155.37Chaperone protein dnaK OS=Pelodictyon luteolum (st... [more]
DNAK_CHLTE1.115e-3158.20Chaperone protein dnaK OS=Chlorobium tepidum GN=dn... [more]
DNAK_NITOC1.456e-3155.28Chaperone protein dnaK OS=Nitrosococcus oceani (st... [more]
DNAK_LEPBP1.901e-3154.10Chaperone protein dnaK OS=Leptospira biflexa serov... [more]
DNAK_LEPBA1.901e-3154.10Chaperone protein dnaK OS=Leptospira biflexa serov... [more]
DNAK_CHLP81.901e-3156.56Chaperone protein dnaK OS=Chlorobaculum parvum (st... [more]
DNAK_APHHA2.483e-3154.55Chaperone protein dnaK OS=Aphanothece halophytica ... [more]
DNAK_THEYD3.243e-3153.66Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
DNAK_PROVI4.236e-3155.37Chaperone protein dnaK OS=Prosthecochloris vibriof... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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