FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBJ (Chaperone protein dnaK OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30
Identity = 66/122 (54.10%), Postives = 85/122 (69.67%), Query Frame = 3
Query:  318 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            EK++GIDLGTTNS V+ MEGG P ++ N+EG RTTPS+VA+T  G+ LVGQ AK QA+ N  NT  S KRFIGR++ E + E K VSY+V+R  N  VK +  A   +F  +EISA VL  +
Sbjct:    4 EKIIGIDLGTTNSVVSVMEGGDPVVIQNSEGARTTPSIVAFTAKGENLVGQFAKNQAITNAVNTIRSAKRFIGRRIGECESEMKHVSYKVIRSGNEGVKFETSA--GEFTPQEISARVLMKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSL (Chaperone protein dnaK OS=Geobacter sulfurreducens GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30
Identity = 68/124 (54.84%), Postives = 94/124 (75.81%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVS---YRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+P ++ NAEG RTTPS+VA+ + G+RLVGQ AKRQAV NPENT F++KR IGRK  + ++  K +S   +++V+ +NG+  ++  A GK ++A EISA VL+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTTPSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKY-DTEEVRKDISISPFKIVKADNGDAWVE--ARGKMYSAPEISAMVLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30
Identity = 66/123 (53.66%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG  P ++ NAEG RTTPS+VA+T+ G+RLVGQ AKRQ V NPE TFF+VKR IGR+  +  V+ + K V Y+VVR +NG+  ++  + GK+++  +ISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMEGASPKVIENAEGARTTPSIVAFTEDGERLVGQPAKRQGVTNPERTFFAVKRLIGRRYDDPTVEKDKKLVPYKVVRADNGDAWVE--SDGKKYSPSQISAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK1_SYNPX (Chaperone protein dnaK1 OS=Synechococcus sp. (strain WH8102) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30
Identity = 61/121 (50.41%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            ++VGIDLGTTNS VA +E G+P ++ NAEG RTTPSVV Y+K  + LVGQ+A+RQ V++P NTF ++KRF+GR   E++D S  V Y V  ++ G V++ CP   +++A EE+ A ++R L
Sbjct:    3 RIVGIDLGTTNSVVAVLEAGRPHVIANAEGGRTTPSVVGYSKDQELLVGQLARRQLVLSPRNTFSNLKRFVGRDWEELEDSSLAVPYTVRANDRGQVRVPCPVTEREYAPEELVASIIRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK3_ANASP (Chaperone protein dnaK3 OS=Anabaena sp. (strain PCC 7120) GN=dnaK3 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30
Identity = 65/121 (53.72%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA +EGG+P ++ N+EG RTTPS+V + K GDRLVGQ+AKRQAV N ENT FS+KRFIGR+  + + E  +V Y  V+  +  V  D    G+ +  +EISA +L+ L
Sbjct:    3 KVIGIDLGTTNSCVAVLEGGQPIVIANSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAENTIFSIKRFIGRRWEDTETERDRVPYGCVKGRDDTV--DVQIRGRNYTPQEISAMILQKL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPB (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain BS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30
Identity = 66/122 (54.10%), Postives = 91/122 (74.59%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIG-KQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G KPT++ N+EG RTTPS+VA+TK G+RLVG  AKRQA+ N ENT FS+KRF+GRK  E+ +E K   Y+V  + NG  +++   IG K ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTKPTVIENSEGYRTTPSMVAFTKNGERLVGHAAKRQAITNAENTIFSIKRFMGRKFDEISNEKKIAPYKVT-NVNGEARVE---IGDKTYSPQEISAMILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30
Identity = 66/124 (53.23%), Postives = 92/124 (74.19%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVS---YRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+P ++ N+EG RTTPS+VA+ + G+RLVGQ AKRQAV NPENT F++KR IGRK  + D+  K +S   +++V+ +NG+  +D    GK ++  E+SA VL+ +
Sbjct:    3 KVIGIDLGTTNSCVAIMEGGEPVVIANSEGSRTTPSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKF-DTDEVRKDISISPFKIVKADNGDAWVD--VRGKMYSPPEVSAIVLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DEIGD (Chaperone protein dnaK OS=Deinococcus geothermalis (strain DSM 11300) GN=dnaK PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30
Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K VGIDLGTTNS +A MEGG+P ++ NAEG RTTPSVVAY K  +RLVGQIA+RQA +NP+ T F VKRFIGR+  EV +E+ ++ + V     G+V+++    GK  A E++SA VLR L
Sbjct:    3 KAVGIDLGTTNSVIATMEGGRPEVIVNAEGARTTPSVVAY-KGDERLVGQIARRQAALNPKATLFEVKRFIGRRWDEVKEEAARMPFTVKEGPGGSVRIE--VNGKDLAPEQVSAEVLRKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 66/123 (53.66%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA MEG  P ++ NAEG RTTPS+VA+T+ G+RLVGQ AKRQ+V NPE TFF+VKR IGR+  +  V+ +   V Y +VR +NG+  ++  A GK+++  +ISA VL+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMEGSTPKVIENAEGARTTPSIVAFTEDGERLVGQPAKRQSVTNPERTFFAVKRLIGRRYDDPTVEKDKHLVPYSIVRADNGDAWVE--ADGKKYSPSQISAFVLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DESAH (Chaperone protein dnaK OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA ME G+P ++TN+EG RTTPSVVA T+ GDRLVGQ AKRQA+ NPENT F VKR IGRK    ++  + K + Y++    NG+ +++    GKQ +  EIS+ +L ++
Sbjct:    3 KIIGIDLGTTNSCVAVMEAGEPKVITNSEGNRTTPSVVALTEGGDRLVGQTAKRQAITNPENTVFGVKRLIGRKFDSPQIQGDKKVLPYKIEASANGDTRINLR--GKQHSPAEISSFILANI 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LEPBJ1.610e-3054.10Chaperone protein dnaK OS=Leptospira borgpeterseni... [more]
DNAK_GEOSL1.610e-3054.84Chaperone protein dnaK OS=Geobacter sulfurreducens... [more]
DNAK_AZOC51.610e-3053.66Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK1_SYNPX1.610e-3050.41Chaperone protein dnaK1 OS=Synechococcus sp. (stra... [more]
DNAK3_ANASP2.102e-3053.72Chaperone protein dnaK3 OS=Anabaena sp. (strain PC... [more]
DNAK_CHLPB3.586e-3054.10Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_GEOMG6.117e-3053.23Chaperone protein dnaK OS=Geobacter metallireducen... [more]
DNAK_DEIGD6.117e-3056.20Chaperone protein dnaK OS=Deinococcus geothermalis... [more]
DNAK_XANP27.989e-3053.66Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
DNAK_DESAH7.989e-3052.85Chaperone protein dnaK OS=Desulfobacterium autotro... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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