FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK1_THEEB (Chaperone protein dnaK1 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA +EGG P ++ NAEG RTTPS+VA+ K G+RLVGQ+AKRQA+ N ENT FS+KRFIGR+  E   E  +V Y  V   +G V  D     + +  +EISA VL+ L
Sbjct:    3 KIIGIDLGTTNSCVAVLEGGNPVVIPNAEGGRTTPSIVAFGKSGERLVGQLAKRQAITNAENTIFSIKRFIGRRWEETAQERARVPYACVPGRDGMV--DVQIRDRTYTPQEISAMVLQKL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RUBXD (Chaperone protein dnaK OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 65/122 (53.28%), Postives = 92/122 (75.41%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYT-KIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K +GIDLGTTNS VA +EGG P ++ NAEG+RTTPSVVA+  K G+RLVGQ+A+RQAV NPE T +S+KRF+GR+ ++V  E+++V Y+VV   +G+V++      K ++  EISA +L+ L
Sbjct:    3 KSIGIDLGTTNSCVAVLEGGDPVVIPNAEGERTTPSVVAFDRKSGERLVGQLARRQAVTNPERTVYSIKRFMGRRYNDVKQEAERVGYQVVPGPHGDVRVRLG--DKDYSPPEISAMILQKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PROA2 (Chaperone protein dnaK OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA+TK G+RL+G  AKRQA+ N +NT FS+KRF+GRK  EV +E K   Y+VV + NG  +++     K ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGYRTTPSMVAFTKNGERLIGHAAKRQAITNAKNTVFSIKRFMGRKFDEVPNEKKIAPYKVV-NINGEARVEID--DKNYSPQEISAMILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: HSP77_YEAST (Heat shock protein SSC1, mitochondrial OS=Saccharomyces cerevisiae GN=SSC1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29
Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 3
Query:  312 VNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            V   V+GIDLGTTNSAVA MEG  P I+ NAEG RTTPSVVA+TK G+RLVG  AKRQAVVNPENT F+ KR IGR+   +EV  + KQV Y++V+  NG+  ++  A G+ ++  +I   VL  +
Sbjct:   28 VQGSVIGIDLGTTNSAVAIMEGKVPKIIENAEGSRTTPSVVAFTKEGERLVGIPAKRQAVVNPENTLFATKRLIGRRFEDAEVQRDIKQVPYKIVKHSNGDAWVE--ARGQTYSPAQIGGFVLNKM 151          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: HSP7M_SCHPO (Heat shock 70 kDa protein, mitochondrial OS=Schizosaccharomyces pombe GN=ssp1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29
Identity = 70/145 (48.28%), Postives = 91/145 (62.76%), Query Frame = 3
Query:  255 LNNEKNNTRRRCNVGPVRVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGR--KMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            L+  +   R   N      V   V+GIDLGTT S +A MEG  P ++ NAEG RTTPSVVA+TK G+RLVG  AKRQAV+NPENTFF+ KR IGR  K  EV  + K+V Y++V   NG+  L+  A GK ++  +I   +L  +
Sbjct:   29 LHGSRMTARWNSNASGNEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLE--ARGKTYSPSQIGGFILSKM 171          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PELCD (Chaperone protein dnaK OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29
Identity = 67/123 (54.47%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM-SEVDDESKQVS-YRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+P ++ NAEG RTTPS+VA+T+ G+RLVGQ AKRQAV NPENT F++KR IGRK  S+      Q+S + +V+ +NG+  +D     K+++  EISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTTPSMVAFTENGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDSDAVRRDIQISPFEIVKADNGDAWVD--VRDKKYSPPEISAMILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.178e-29
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A +EGGK  ++ N+EG RTTPS+VAYTK G+ LVG  AKRQAV NP+NTF++VKR IGRK   +EV  +   V Y++ + +NG+  +   A GK+ A +EISA VL  +
Sbjct:    3 KIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWV-ATADGKKLAPQEISAKVLEKM 124          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.178e-29
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A +EGGK  ++ N+EG RTTPS+VAYTK G+ LVG  AKRQAV NP+NTF++VKR IGRK   +EV  +   V Y++ + +NG+  +   A GK+ A +EISA VL  +
Sbjct:    3 KIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWV-ATADGKKLAPQEISAKVLEKM 124          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_XYLF2 (Chaperone protein dnaK OS=Xylella fastidiosa (strain M23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.178e-29
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS +A +EGGK  ++ N+EG RTTPS+VAYTK G+ LVG  AKRQAV NP+NTF++VKR IGRK   +EV  +   V Y++ + +NG+  +   A GK+ A +EISA VL  +
Sbjct:    3 KIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWV-ATADGKKLAPQEISAKVLEKM 124          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.178e-29
Identity = 68/123 (55.28%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM-SEVDDESKQVS-YRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+P ++ NAEG RTTPS+VA T  G+RLVGQ AKRQAV NPENT F++KR IGRK  SE   +   +S +++V+ +NG+  ++    G++++A EISA VL+ +
Sbjct:    3 KVIGIDLGTTNSCVAIMEGGEPIVIANAEGSRTTPSMVAITDSGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDSEAVKKDIAISPFKIVKADNGDAWVE--VRGQKYSAPEISAMVLQKM 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK1_THEEB7.989e-3054.55Chaperone protein dnaK1 OS=Thermosynechococcus elo... [more]
DNAK_RUBXD1.780e-2953.28Chaperone protein dnaK OS=Rubrobacter xylanophilus... [more]
DNAK_PROA21.780e-2952.07Chaperone protein dnaK OS=Prosthecochloris aestuar... [more]
HSP77_YEAST2.324e-2955.56Heat shock protein SSC1, mitochondrial OS=Saccharo... [more]
HSP7M_SCHPO3.965e-2948.28Heat shock 70 kDa protein, mitochondrial OS=Schizo... [more]
DNAK_PELCD3.965e-2954.47Chaperone protein dnaK OS=Pelobacter carbinolicus ... [more]
DNAK_XYLFT5.178e-2953.66Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM5.178e-2953.66Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLF25.178e-2953.66Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_GEOUR5.178e-2955.28Chaperone protein dnaK OS=Geobacter uraniireducens... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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