FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_STRMK (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29
Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--SEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+GGK  ++ N+EG RTTPS+VAYTK G+ LVG  AKRQAV NP+NTF++VKR IGRK   +EV  +   V Y ++  +NG+  +   + GK+ A +EISA VL  +
Sbjct:    3 KIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWV-ATSDGKKMAPQEISAKVLEKM 124          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCS (Chaperone protein dnaK OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29
Identity = 66/123 (53.66%), Postives = 90/123 (73.17%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEG +  ++ NAEG RTTPS+VA+T+ G+RLVGQ AKRQAV NPENTFF++KR IGR+  +     +   V YR+V  +NG+  ++  + GKQ++  EISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAIMEGTQAKVIENAEGARTTPSMVAFTQGGERLVGQPAKRQAVTNPENTFFAIKRLIGRRYDDPLTQKDKGLVPYRIVGGKNGDAWVE--SHGKQYSPSEISAFILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK1_PROMA (Chaperone protein dnaK1 OS=Prochlorococcus marinus GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29
Identity = 55/121 (45.45%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            ++VGIDLGTTNS +  +E G+P ++ NAEG RTTPSV+ YTK  + +VGQ A+RQ V+NP+NTF ++KR++GR   E+++ S  V+Y +  +  G V++ CP   +++A EE+   ++R L
Sbjct:    3 RIVGIDLGTTNSVIGVLEAGRPFVIANAEGSRTTPSVIGYTKESELVVGQQARRQLVLNPKNTFSNLKRYVGRSWDELEENSLNVAYTIRANNQGCVRVTCPITEREYAPEELIGSIIRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_SPHWW (Chaperone protein dnaK OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGGKP ++ NAEG RTTPS+VA+ K G+RL+GQ AKRQAV NP+NT F+VKR IGR+  +     +++ V Y +V+  NG+  +   A G+ ++  +ISA  L+ +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGKPKVIENAEGARTTPSIVAFAKDGERLIGQPAKRQAVTNPDNTIFAVKRLIGRRFDDPITRKDTELVPYHIVKGPNGDAWVQ--AGGEDYSPSQISAFTLQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_PARD8 (Chaperone protein dnaK OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 59/121 (48.76%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA +EG +P ++ N+EG+RTTPS+VA+ + G+R VG  AKRQA+ NPE T FS+KRF+G    +V  E  +V Y+VVR +N   ++D    G+ +  +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVLEGNEPVVIANSEGKRTTPSIVAFVEGGERKVGDPAKRQAITNPEKTIFSIKRFMGETYDQVQKEINRVPYKVVRGDNNTPRVDIE--GRLYTPQEISAMILQKM 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GEOLS (Chaperone protein dnaK OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 64/124 (51.61%), Postives = 92/124 (74.19%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVS---YRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS VA MEGG+P ++ N+EG RTTPS+VA+T+ G+R+VGQ AKRQAV NPENT F++KR IGRK  E +   K ++   +++V+ +NG+  +D     K+++  EISA +L+ +
Sbjct:    3 KVIGIDLGTTNSCVAIMEGGEPIVIANSEGSRTTPSMVAFTEAGERIVGQQAKRQAVTNPENTLFAIKRLIGRKF-ETEAVKKDIAISPFKIVKADNGDAWVD--VRDKKYSPPEISAIILQKM 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_DEIDV (Chaperone protein dnaK OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K VGIDLGTTNS ++ MEGG+P ++ NAEG RTTPSVVAY K  +RLVGQIA+RQA +NP  T F VKRFIGR+  EV +E+ +  ++V     G+V+++    G+  A E++SA VLR L
Sbjct:    3 KAVGIDLGTTNSVISVMEGGRPEVIVNAEGGRTTPSVVAY-KGDERLVGQIARRQAALNPAATLFEVKRFIGRRWDEVKEEAARSPFKVKEGPGGSVRIE--VNGQDLAPEQVSAEVLRKL 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT3 (Chaperone protein dnaK OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDEN-GNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS VA M+G  P ++ NAEG RTTPS+VA+TK G+RLVG  AKRQA+ N  NT FS+KRF+GR   EV +E+K V Y++V + N   VK+      K  + +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGKDPVVIANAEGYRTTPSMVAFTKSGERLVGHAAKRQAITNATNTIFSIKRFMGRTQDEVPEETKMVPYQIVSEGNQARVKIG----DKTHSPQEISAMILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_TREDE (Chaperone protein dnaK OS=Treponema denticola GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28
Identity = 61/121 (50.41%), Postives = 89/121 (73.55%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K++GIDLGTTNS V+ MEGG+P ++ N+EG RTTPS+V +T   +R+VGQ AK Q + NPE T +SVKRFIG + SE+ DE K+V Y++V  +  +V++D    GK ++ +EISA +L+ +
Sbjct:    3 KIIGIDLGTTNSCVSVMEGGEPVVIPNSEGGRTTPSIVGFTSKDERVVGQPAKNQMITNPERTVYSVKRFIGHRYSELTDELKRVPYKIV-PQGEDVRIDID--GKLYSTQEISAFILQKM 120          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK1_SYNY3 (Chaperone protein dnaK1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KV+GIDLGTTNS  + +EGGKP ++TN EG RTTPS+V +TK   RLVGQ+AKRQ+V N ENT +S+KRFIGR+  +  +E  +V Y  V+  +  V +     G+ +  +EISA +L+ L
Sbjct:    3 KVIGIDLGTTNSCASVLEGGKPIVITNTEGGRTTPSIVGFTKGSQRLVGQLAKRQSVTNAENTVYSIKRFIGRRWDDTVEERSRVPYNCVKGRDDTVSVSIR--GQSYTPQEISAMILQKL 121          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STRMK6.763e-2953.66Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_RHOCS6.763e-2953.66Chaperone protein dnaK OS=Rhodospirillum centenum ... [more]
DNAK1_PROMA6.763e-2945.45Chaperone protein dnaK1 OS=Prochlorococcus marinus... [more]
DNAK_SPHWW8.833e-2952.03Chaperone protein dnaK OS=Sphingomonas wittichii (... [more]
DNAK_PARD88.833e-2948.76Chaperone protein dnaK OS=Parabacteroides distason... [more]
DNAK_GEOLS8.833e-2951.61Chaperone protein dnaK OS=Geobacter lovleyi (strai... [more]
DNAK_DEIDV8.833e-2954.55Chaperone protein dnaK OS=Deinococcus deserti (str... [more]
DNAK_CHLT38.833e-2952.46Chaperone protein dnaK OS=Chloroherpeton thalassiu... [more]
DNAK_TREDE1.154e-2850.41Chaperone protein dnaK OS=Treponema denticola GN=d... [more]
DNAK1_SYNY31.154e-2850.41Chaperone protein dnaK1 OS=Synechocystis sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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