FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  +INPDE           ILSG+   K+QD+
Sbjct:  295 VSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQTGKIQDV 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.426e-25
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  ++PV K L DAK+DKS V ++VLVGGSTRIPK+Q+L+ DFFNGKEL K+INPDE           IL+G+ + K QD+
Sbjct:  294 TSITRARFEELCADLFRSTLDPVGKVLADAKIDKSQVEEIVLVGGSTRIPKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTGDTSSKTQDI 390          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.426e-25
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TITRARFEEL  DLFR  ++PVE+ L+DAKMDK +VHDVVLVGGSTRIPKVQ L+ DFF GKEL K+INPDE           IL+G  +++ + L
Sbjct:  298 ATITRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGL 394          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.426e-25
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TITRARFEEL  DLFR  ++PVE+ L+DAKMDK +VHDVVLVGGSTRIPKVQ L+ DFF GKEL K+INPDE           IL+G  +++ + L
Sbjct:  297 ATITRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 1.863e-25
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPV+K L DAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  ++INPDE           ILSG+ + K QDL
Sbjct:  293 TSITRARFEELCADLFRSTLEPVDKVLSDAKIDKSKVDEIVLVGGSTRIPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSGDTSSKTQDL 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.433e-25
Identity = 60/97 (61.86%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TITRARFEEL  DLFR  ++PVE+ L+DAKMDK  VHDVVLVGGSTRIPKV QL+ DFF GKEL K+INPDE  X        IL+G  +++ + L
Sbjct:  298 ATITRARFEELCGDLFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFGGKELNKSINPDEAVXYGAAVQAFILTGGKSKQTEGL 394          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.433e-25
Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +++TRARFEEL  DLFR  +EPVEK L+D+K+DKS + ++VLVGGSTRIPK+Q+L+ DFFNGKE  ++INPDE           IL+G+ + K QDL
Sbjct:  293 TSLTRARFEELCADLFRSTLEPVEKVLKDSKLDKSQIDEIVLVGGSTRIPKIQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSTKTQDL 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.433e-25
Identity = 55/95 (57.89%), Postives = 71/95 (74.74%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TRARFEELN DLFRK M PV+K + DA ++K+ + ++VLVGGSTRIPKVQQLL++FFNGKE  K +NPDE           ILSGEG E+ +++
Sbjct:  329 LTRARFEELNNDLFRKTMGPVKKAMDDAGLEKNQIDEIVLVGGSTRIPKVQQLLKEFFNGKEPSKGVNPDEAVAFGAAVQGSILSGEGGEETKEI 423          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TRARFEELN DLFRK M PV+K + DA + KS + ++VLVGGSTRIPKVQQLL+DFF GKE  K +NPDE           ILSGEG ++ +D+
Sbjct:  328 LTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDI 422          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TRARFEELN DLFRK M PV+K + DA + KS + ++VLVGGSTRIPKVQQLL+DFF GKE  K +NPDE           ILSGEG ++ +D+
Sbjct:  328 LTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDI 422          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_DROSI8.361e-2660.00Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP71_CANAL1.426e-2558.76Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_LEIMA1.426e-2560.82Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_LEIDO1.426e-2560.82Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP72_CANAL1.863e-2559.79Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP74_TRYBB2.433e-2561.86Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP73_YEAST2.433e-2556.70Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
BIP_SPIOL2.433e-2557.89Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP2_ARATH4.150e-2558.95Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH4.150e-2558.95Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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