FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            T+TRA+FEELNMDLF+K ++PVE+ L+DAK+ KS V D+VLVGGSTRIPKVQ LL++FF GK+  K INPDE           +LSGE
Sbjct:  340 TLTRAKFEELNMDLFKKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGE 427          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            T+TRA+FEELNMDLF+K ++PVE+ L+DAK+ KS V D+VLVGGSTRIPKVQ LL++FF GK+  K INPDE           +LSGE
Sbjct:  340 TLTRAKFEELNMDLFKKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGE 427          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 281
            ++ITRARFEEL  DLFR  MEPVE+ LRDAK+DKS+VH++VLVGGSTRIPK+Q+L+ DFFN K+  K+INPDE           ILSG+ + K
Sbjct:  163 TSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKLVSDFFN-KDANKSINPDEAVAYGAAVQAAILSGDTSSK 254          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 281
            ++ITRARFEEL  DLFR  MEPVE+ LRDAK+DKS+VH++VLVGGSTRIPK+Q+L+ D+FN KE  K+INPDE           ILSG+ + K
Sbjct:  293 TSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQRLVSDYFN-KEANKSINPDEAVAYGAAVQAAILSGDTSSK 384          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.513e-24
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TITRARFEEL  +LFR  ++PVE+ L+DAKMDK  VHDVVLVGGSTRIPKV QL+ DFF GKEL K+I PDE           IL+G  +++ + L
Sbjct:  298 ATITRARFEELCGELFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFRGKELKKSIQPDEAVAYGAAVQAFILTGGKSKQTEGL 394          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.513e-24
Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TI+RARFEEL  + FR  + PVEK L  + +DK ++H+VVLVGGSTRIPK+Q L+++FFNGKE C++INPDE           ILSG  +EK+Q+L
Sbjct:  296 TTISRARFEELCNEKFRSTLVPVEKALESSGLDKRSIHEVVLVGGSTRIPKIQTLIKNFFNGKEPCRSINPDEAVAYGAAVQAAILSGNQSEKIQEL 392          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.513e-24
Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TI+RARFEEL  + FR  + PVEK L  + +DK ++H+VVLVGGSTRIPK+Q L+++FFNGKE C++INPDE           ILSG  +EK+Q+L
Sbjct:  296 TTISRARFEELCNEKFRSTLVPVEKALESSGLDKRSIHEVVLVGGSTRIPKIQTLIKNFFNGKEPCRSINPDEAVAYGAAVQAAILSGNQSEKIQEL 392          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.513e-24
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 281
            ++ITRARFEEL  DLFR  ++PV++ L DAK+DKS VH++VLVGGSTRIP++Q+L+ D+FNGKE  K+INPDE           ILSG+ + K
Sbjct:  293 TSITRARFEELCQDLFRSTLQPVDRVLTDAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSK 385          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 3.513e-24
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG-EGNEKV 284
            T+TRA+FEELN DLF+K ++PVE+ L+DAK+ KS + D+VLVGGSTRIPKVQ L+++FFNGK+  K INPDE           +LSG EG E +
Sbjct:  330 TLTRAKFEELNNDLFKKTLKPVEQVLKDAKVSKSEIDDIVLVGGSTRIPKVQALIEEFFNGKKASKGINPDEAVAFGAAVQAGVLSGEEGTEDI 423          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.588e-24
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR+ +EPVEK L DAKMDK+ +H  VLVGGSTRIPKVQ+LLQ FF GK L  +INPDE           ILSG+ + ++QD+
Sbjct:  294 VSRARFEELCADLFRQTLEPVEKALNDAKMDKNQIHVYVLVGGSTRIPKVQRLLQSFFCGKSLNLSINPDEAVAYGAAVQAAILSGDKSTEIQDV 388          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPKA2.059e-2461.3678 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW2.059e-2461.3678 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP70_PENCI2.690e-2461.29Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_EMENI2.690e-2461.29Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_TRYCR3.513e-2458.76Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_THEPA3.513e-2454.64Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_THEAN3.513e-2454.64Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_NEUCR3.513e-2456.99Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
GRP78_NEUCR3.513e-2457.4578 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP70_CERCA4.588e-2458.95Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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