FC931643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 321 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 321 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 322 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 409
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 321 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 321 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 408
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 319 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 406
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.974e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269 T+TRA+FEELNMDLFR M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE +LSG+ Sbjct: 322 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 409
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP76_YEAST (Heat shock protein SSB2 OS=Saccharomyces cerevisiae GN=SSB2 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.884e-23 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEG-NEKVQDL 293 S++TRARFE+LN LF+ +EPVE+ L+DAK+ KS + +VVLVGGSTRIPKVQ+LL DFF+GK+L K+INPDE IL+G+ +++ +DL Sbjct: 298 SSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDL 395
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP75_YEAST (Heat shock protein SSB1 OS=Saccharomyces cerevisiae GN=SSB1 PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 3.884e-23 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEG-NEKVQDL 293 S++TRARFE+LN LF+ +EPVE+ L+DAK+ KS + +VVLVGGSTRIPKVQ+LL DFF+GK+L K+INPDE IL+G+ +++ +DL Sbjct: 298 SSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDL 395
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.073e-23 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 +++RA+FEELNMDLF+K ++PV++ L DAKM + DVV VGGSTRIPKVQ+L+++FFNGK++ K INPDE +LSGE E V+D+ Sbjct: 331 SLSRAKFEELNMDLFKKTLKPVQQVLDDAKMKPDEIDDVVFVGGSTRIPKVQELIENFFNGKKISKGINPDEAVAFGAAVQGGVLSGE--EGVEDI 424 The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bpback to top |