FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.544e-30
Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR C++PVEK L+D+K+DK ++H++VLVGGSTRIPKVQQLLQ+FFNGKEL K+INPDE           ILS EG  KV DL
Sbjct:  293 TSITRARFEELCADLFRGCLDPVEKVLKDSKLDKKSIHEIVLVGGSTRIPKVQQLLQEFFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADL 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.544e-30
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  297 TSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.544e-30
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  297 TSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.544e-30
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  297 TSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.544e-30
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  297 TSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP7X_PIG (Heat shock 70 kDa protein (Fragment) OS=Sus scrofa PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.247e-29
Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPK+Q+LLQDFFNG+EL K+INPDE           +L G+  EKVQDL
Sbjct:   35 TSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDL 131          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.247e-29
Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPK+Q+LLQDFFNG+EL K+INPDE           +L G+  EKVQDL
Sbjct:  297 TSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.247e-29
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  297 TSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 128.257 bits (321), Expect = 1.247e-29
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  297 TSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.628e-29
Identity = 67/98 (68.37%), Postives = 76/98 (77.55%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG-EGNEKVQDL 293
            STITRARFE++  D FRK MEPVEK LRD+K+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE CK+INPDE           ILSG + +EK+QDL
Sbjct:  297 STITRARFEDMCGDYFRKTMEPVEKVLRDSKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPCKSINPDEAVAFGATVQAAILSGNDSSEKLQDL 394          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS7C1_DICDI9.544e-3064.95Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HS71L_PIG9.544e-3065.98Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MACFA9.544e-3065.98Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS71L_HUMAN9.544e-3065.98Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HS71L_BOVIN9.544e-3065.98Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP7X_PIG1.247e-2964.95Heat shock 70 kDa protein (Fragment) OS=Sus scrofa... [more]
HSP76_PIG1.247e-2964.95Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HS71L_RAT1.247e-2965.98Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_MOUSE1.247e-2965.98Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP70_ACHKL1.628e-2968.37Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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