FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBY (Chaperone protein dnaK OS=Acinetobacter baumannii (strain AYE) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNE 278
            +TRA+ E L  DL  + +EP +  L+DA +  S + DV+LVGG +R+P VQQ +Q+FF G+E  K++NPDE           +LSG+ N+
Sbjct:  299 VTRAKLEGLVADLVARTIEPCKIALKDAGLSTSDISDVILVGGQSRMPLVQQKVQEFF-GREPRKDVNPDEAVAIGAAIQGAVLSGDKND 387          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBT (Chaperone protein dnaK OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaK PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNE 278
            +TRA+ E L  DL  + +EP +  L+DA +  S + DV+LVGG +R+P VQQ +Q+FF G+E  K++NPDE           +LSG+ N+
Sbjct:  299 VTRAKLEGLVADLVARTIEPCKIALKDAGLSTSDISDVILVGGQSRMPLVQQKVQEFF-GREPRKDVNPDEAVAIGAAIQGAVLSGDKND 387          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TR++ EE+  DL  + +EP  + L+DA +D S + +VVLVGG TR+P++QQ++++FF G+E  + +NPDE           +L GE
Sbjct:  294 LTRSKLEEMVRDLVDRSIEPCRQALKDAGIDASKIDEVVLVGGQTRMPRIQQVVKEFF-GREPHRGVNPDEVVAIGAAIQGGVLKGE 379          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBC (Chaperone protein dnaK OS=Acinetobacter baumannii (strain ACICU) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNE 278
            +TRA+ E L  DL  + +EP +  L+DA +  S + DV+LVGG +R+P VQQ +Q+FF G+E  K++NPDE           +LSG+ N+
Sbjct:  299 VTRAKLEGLVADLVARTIEPCKIALKDAGLSTSDISDVILVGGQSRMPLVQQKVQEFF-GREPRKDVNPDEAVAIGAAIQGAVLSGDKND 387          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIB5 (Chaperone protein dnaK OS=Acinetobacter baumannii (strain AB0057) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNE 278
            +TRA+ E L  DL  + +EP +  L+DA +  S + DV+LVGG +R+P VQQ +Q+FF G+E  K++NPDE           +LSG+ N+
Sbjct:  299 VTRAKLEGLVADLVARTIEPCKIALKDAGLSTSDISDVILVGGQSRMPLVQQKVQEFF-GREPRKDVNPDEAVAIGAAIQGAVLSGDKND 387          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIB3 (Chaperone protein dnaK OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNE 278
            +TRA+ E L  DL  + +EP +  L+DA +  S + DV+LVGG +R+P VQQ +Q+FF G+E  K++NPDE           +LSG+ N+
Sbjct:  299 VTRAKLEGLVADLVARTIEPCKIALKDAGLSTSDISDVILVGGQSRMPLVQQKVQEFF-GREPRKDVNPDEAVAIGAAIQGAVLSGDKND 387          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMA (Chaperone protein dnaK2 OS=Prochlorococcus marinus GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.790e-13
Identity = 36/88 (40.91%), Postives = 57/88 (64.77%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            T+TRA+FEEL  +L  +C  PVE+ L+DAK+    + ++V+VGGSTR+P V++L++    GK+  + +NPDE           +L+GE
Sbjct:  293 TLTRAKFEELASNLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVKELVKR-VTGKDPNQTVNPDEVVAVGAAIQGGVLAGE 379          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_TREPS (Chaperone protein dnaK OS=Treponema pallidum subsp. pallidum (strain SS14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.644e-13
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            T++R+ FE++  DLF +  EP  K L+DA +    + +++LVGGSTR+PKV  +++D F GKE  K +NPDE           IL G+
Sbjct:  293 TLSRSEFEKMTDDLFERTKEPCRKALKDAGISADRIDEILLVGGSTRMPKVAHVIKDVF-GKEGSKGVNPDEAVAIGAAIQGGILGGD 379          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_TREPA (Chaperone protein dnaK OS=Treponema pallidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.644e-13
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            T++R+ FE++  DLF +  EP  K L+DA +    + +++LVGGSTR+PKV  +++D F GKE  K +NPDE           IL G+
Sbjct:  293 TLSRSEFEKMTDDLFERTKEPCRKALKDAGISADRIDEILLVGGSTRMPKVAHVIKDVF-GKEGSKGVNPDEAVAIGAAIQGGILGGD 379          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_THISH (Chaperone protein dnaK OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.644e-13
Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TRA+ E L  +L ++ +EP +  L+DA +  S + DV+LVGG TR+PKVQ  +++FF GKE  K++NPDE           +L GE
Sbjct:  300 VTRAKLESLVEELIKRTIEPCKVALKDAGLSVSDIDDVILVGGQTRMPKVQDAVKNFF-GKEPRKDVNPDEAVAVGAAIQAGVLGGE 385          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ACIBY2.790e-1342.22Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK_ACIBT2.790e-1342.22Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK_ACIBL2.790e-1340.23Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]
DNAK_ACIBC2.790e-1342.22Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK_ACIB52.790e-1342.22Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK_ACIB32.790e-1342.22Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK2_PROMA2.790e-1340.91Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_TREPS3.644e-1340.91Chaperone protein dnaK OS=Treponema pallidum subsp... [more]
DNAK_TREPA3.644e-1340.91Chaperone protein dnaK OS=Treponema pallidum GN=dn... [more]
DNAK_THISH3.644e-1342.53Chaperone protein dnaK OS=Thioalkalivibrio sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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