FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_HALWD (Chaperone protein dnaK OS=Haloquadratum walsbyi (strain DSM 16790) GN=dnaK PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 284
            T++RA+FE L  DL  + + P E+ L DA  D S + +V+LVGGSTR+P+V++ ++D   G E  KN+NPDE           +L+G+ ++ V
Sbjct:  273 TLSRAKFESLTEDLIERTVGPTEQALEDAGYDDSDIDEVILVGGSTRMPQVREKVEDLL-GTEPKKNVNPDEAVALGAAIQGGVLAGDVDDIV 364          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_DICNV (Chaperone protein dnaK OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TRA+ E L  DL  + +EP    ++DA +  S + DV+LVGG TR+PKVQ+ +++FF GKE  K++NPDE           +L G+
Sbjct:  300 LTRAKLESLVADLIERSLEPCRIAMKDAGLSNSDITDVILVGGQTRMPKVQEAVKNFF-GKEPRKDVNPDEAVAMGAAIQGGVLGGQ 385          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_DESHD (Chaperone protein dnaK OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            ITRA+FEEL  DL    + P  + L DAK+  + V+ V+LVGGSTRIP VQ+ ++   +GKE  K +NPDE           +L+GE
Sbjct:  271 ITRAKFEELTADLVEATLGPTRQALADAKLSWNEVNQVILVGGSTRIPAVQEAIKK-LSGKEPHKGVNPDEVVALGAAIQGGVLAGE 356          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +T+ RA+FEEL   L  +C  PVE  L+DAK+ K  + +VVLVGGSTRIP V++L+Q   + K   +++NPDE           +L+GE
Sbjct:  291 TTLNRAKFEELCSTLIDRCRIPVETALKDAKLTKEDIDEVVLVGGSTRIPAVRELVQKVLD-KVPKQSVNPDEVVAVGAAVQAGVLAGE 378          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_CLOTE (Chaperone protein dnaK OS=Clostridium tetani GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TRA+F EL  DL    + P++K L+DA+M    +  V+LVGGSTRIP VQ  +++ F GKE  K++NPDE           +L+G+
Sbjct:  272 LTRAKFNELTQDLVEGTLTPMKKALQDAEMSIGEIDKVILVGGSTRIPAVQDAVKN-FTGKEPSKDVNPDECVAMGAAVQAGVLTGD 357          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_CARHZ (Chaperone protein dnaK OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 284
            T+TRA+F EL  DL    M P  + L DA +    +  ++LVGGSTRIP VQ+ ++ FFN KE  K INPDE           +L+GE  + V
Sbjct:  270 TLTRAKFNELTADLVEATMGPTRQALADAGLKPEDIDKILLVGGSTRIPAVQEAIRKFFN-KEPHKGINPDECVAIGAAIQAAVLAGEVKDVV 361          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLI (Chaperone protein dnaK OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 3
Query:    6 TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            T+TRA FEE+  DL  +C  P    L DA +  S +  VVLVGGSTR+P V+ L+++   GKE  +++NPDE           ++ G+
Sbjct:  277 TLTRAHFEEMTSDLLGRCRTPFNNVLHDAGISVSDIDHVVLVGGSTRMPAVKDLVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGD 364          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TRA+FE L  DL ++ +EP +  L+DA +    + +VVLVGG TR+PK+Q+++Q FF GK+  K +NPDE           +L G+
Sbjct:  295 LTRAKFESLVDDLVKRTVEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVQSFF-GKDPHKGVNPDEVVAMGAAIQGGVLQGD 380          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK_ACIAC (Chaperone protein dnaK OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TRA+ E L  +L  + + P    ++DA +  S +HDV+LVGG TR+PKVQ+ +++FF GKE  K++NPDE           +LSG+
Sbjct:  301 LTRAKLESLVEELIERTIAPCRTAIKDAGISVSDIHDVILVGGMTRMPKVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGQVLSGD 386          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: DNAK2_COLP3 (Chaperone protein dnaK 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 269
            +TRA+ E L  D+ +  +EP+++ L+DA +  S + DV+LVGG +R+P VQ+ + DFF GKE  K++NPDE           +LSG+
Sbjct:  300 VTRAKLESLVEDMVKATLEPLKQALKDADLSVSKIDDVILVGGQSRMPLVQKTVTDFF-GKEPRKDVNPDEAVASGAAIQAGVLSGD 385          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HALWD4.759e-1339.78Chaperone protein dnaK OS=Haloquadratum walsbyi (s... [more]
DNAK_DICNV4.759e-1341.38Chaperone protein dnaK OS=Dichelobacter nodosus (s... [more]
DNAK_DESHD4.759e-1344.83Chaperone protein dnaK OS=Desulfitobacterium hafni... [more]
DNAK_CYAPA4.759e-1343.82Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK_CLOTE4.759e-1342.53Chaperone protein dnaK OS=Clostridium tetani GN=dn... [more]
DNAK_CARHZ4.759e-1343.01Chaperone protein dnaK OS=Carboxydothermus hydroge... [more]
DNAK_BIFLI4.759e-1339.77Chaperone protein dnaK OS=Bifidobacterium longum s... [more]
DNAK_BARHE4.759e-1341.38Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_ACIAC4.759e-1341.38Chaperone protein dnaK OS=Acidovorax avenae subsp.... [more]
DNAK2_COLP34.759e-1341.38Chaperone protein dnaK 2 OS=Colwellia psychrerythr... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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