FC931643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.627e-29 Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEEL DLFR +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE IL G+ +E VQDL Sbjct: 295 TSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.627e-29 Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEEL DLFR +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE IL G+ +E VQDL Sbjct: 295 TSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.627e-29 Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEEL DLFR +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE IL G+ +E VQDL Sbjct: 295 TSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 6.186e-29 Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEEL DLFR +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE IL G+ +E VQDL Sbjct: 295 TSITRARFEELCSDLFRGTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.186e-29 Identity = 63/94 (67.02%), Postives = 74/94 (78.72%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 284 ++ITRA+FEEL MDLFR EPVEK LRD+K+ KS +HDVVLVGGSTRIPKVQQLL D+FNGKELCKNINPDE IL+G+ +EK+ Sbjct: 302 ASITRAKFEELCMDLFRGTSEPVEKVLRDSKISKSEIHDVVLVGGSTRIPKVQQLLIDYFNGKELCKNINPDEAVAYGAAVQAAILAGDTSEKM 395
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.080e-29 Identity = 63/97 (64.95%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEELN DLFR ++PVEK LRDAKMDK+ VHD+VLVGGSTRIPK+++LLQDFFNGKEL K+INPDE G+ +E VQDL Sbjct: 295 TSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKMEKLLQDFFNGKELNKSINPDEAVAYGAAVQAESSLGDKSENVQDL 391
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28 Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEEL DLFRK MEPVE+ LRD+K+DK++V+++VLVGGSTRIP+VQ+L+ DFFNGKE CK+INPDE +L+G+ +EK QDL Sbjct: 293 TSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDL 389
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28 Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 + ITRARFEEL DLFR M+PVEK LR AKMDK+ VHD+VLVGGSTRIPKVQ+LL DFF+GKEL K+INPDE ILSG+ +E VQDL Sbjct: 52 TNITRARFEELCADLFRSTMDPVEKALRVAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDL 148
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.800e-28 Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 ++ITRARFEEL DLFR MEPVEK LRD+K+DKS+V+++VLVGGSTRIP++Q+L+ DFFNGKE CK+INPDE IL G+ +EK QDL Sbjct: 293 TSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDL 389
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 2.351e-28 Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 3 Query: 3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293 S I+RARFEELNMDLFR M+PVE+ L DAKMDK +HDVVLVGGSTRIPK+Q+LLQD F GK+L +INPDE IL+G G+ ++QDL Sbjct: 296 SKISRARFEELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDL 392 The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bpback to top |