FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.351e-28
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +H++VLVGGSTRIPK+Q+LLQDFFNG+EL K+INPDE           IL G+ +E +QDL
Sbjct:  297 TSITRARFEELCADLFRGPLEPVEKALRDAKLDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENLQDL 393          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.933e-28
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLF   +EPVEK LRD+K+DK +VH++VLVGGSTRIPKVQ+LL DFFNG+EL K+INPDE           ILSG+ +EK QDL
Sbjct:  293 TSITRARFEELCGDLFSHTIEPVEKVLRDSKIDKGSVHEIVLVGGSTRIPKVQKLLTDFFNGRELNKSINPDEAVAYGAAVQAAILSGDTSEKTQDL 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.599e-27
Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  ++PVEK LRDAKM K+ VH++VLVGGSTRIP++Q+L+ DFFNGKE  K+INPDE           IL+G+ +EKVQDL
Sbjct:  298 TSITRARFEELCADLFRSTLDPVEKVLRDAKMAKNEVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILAGDQSEKVQDL 394          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.790e-27
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +TRARFEELN DLFRK M PV+K + DA ++KS +H++VLVGGSTRIPKVQQLL+D+FNGKE  K +NPDE           ILSGEG ++ +D+
Sbjct:  326 LTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDI 420          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.562e-27
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            +++TRARFEEL  DLFR  +EPVEK LRDAK+DK+ VH++VLVGGSTRIP++ +L+ DFFNGKE  K+INPDE           IL+G+ +EK QDL
Sbjct:  293 TSLTRARFEELCQDLFRSTLEPVEKVLRDAKIDKAAVHEIVLVGGSTRIPRIVKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSEKTQDL 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.877e-27
Identity = 64/98 (65.31%), Postives = 73/98 (74.49%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSG-EGNEKVQDL 293
            STITRARFE++  D FRK MEPV   LRDAK+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE  K+INPDE           ILSG + ++K+QDL
Sbjct:  297 STITRARFEDMCGDYFRKTMEPVAPVLRDAKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPNKSINPDEPVAYGATVQAAILSGNDSSQKLQDL 394          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26
Identity = 59/95 (62.11%), Postives = 72/95 (75.79%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            I+RARFEEL  DLFR  ++PVEK L DAKMDKS++HD+VLVGGSTRIPKVQ LLQ+FF GK L  +INPDE           ILSG+ ++K+QD+
Sbjct:  296 ISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDV 390          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26
Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  ++PVEK L+DAK+DKS V+++VLVGGSTRIPKVQ+L+ DFFNGKE  K+INPDE           IL+G+ + K QDL
Sbjct:  293 TSITRARFEELCQDLFRSTLDPVEKVLKDAKLDKSQVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDL 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26
Identity = 59/95 (62.11%), Postives = 72/95 (75.79%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            I+RARFEEL  DLFR  ++PVEK L DAKMDKS++HD+VLVGGSTRIPKVQ LLQ+FF GK L  +INPDE           ILSG+ ++K+QD+
Sbjct:  296 ISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDV 390          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26
Identity = 59/95 (62.11%), Postives = 72/95 (75.79%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            I+RARFEEL  DLFR  ++PVEK L DAKMDKS++HD+VLVGGSTRIPKVQ LLQ+FF GK L  +INPDE           ILSG+ ++K+QD+
Sbjct:  296 ISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDV 390          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_PLEWA2.351e-2862.89Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP72_USTMA8.933e-2863.92Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_BLAEM2.599e-2761.86Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
BIP3_MAIZE5.790e-2760.00Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
HSP71_PUCGR7.562e-2759.79Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_BRELC9.877e-2765.31Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP74_ANOAL1.290e-2662.11Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP72_PICAN1.290e-2660.82Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP72_ANOAL1.290e-2662.11Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL1.290e-2662.11Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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