FC931643

Overview
NameFC931643
Unique NameFC931643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length293
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.402e-26
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  +INPDE           ILSG+ + K+QD+
Sbjct:  295 VSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDV 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.402e-26
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  +INPDE           ILSG+ + K+QD+
Sbjct:  295 VSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDV 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.402e-26
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  +INPDE           ILSG+ + K+QD+
Sbjct:  295 VSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDV 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.402e-26
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 281
            ++ITRARFEEL  DLFR  M+PVE+ LRDAK+DKS+VH++VLVGGSTRIP++Q+L+ DFFNGKE  K+INPDE           ILSG+   K
Sbjct:  293 TSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSK 385          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.402e-26
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  +INPDE           ILSG+ + K+QD+
Sbjct:  295 VSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDV 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 55/97 (56.70%), Postives = 75/97 (77.32%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++I+RARFE+L  DLFRKC+EPVE+ + DAK+DK  +  VVLVGGSTRIPK+Q+LLQ+F NGKEL K+INPDE           ILSG+ +++++D+
Sbjct:  295 TSISRARFEDLCSDLFRKCLEPVERAILDAKIDKKKIDTVVLVGGSTRIPKIQKLLQEFLNGKELNKSINPDEAVAYGAAVQAAILSGDKSDEIKDV 391          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  ++PVEK LRDAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  ++INPDE           IL+G+ + K QDL
Sbjct:  292 TSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDL 388          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3
Query:    9 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  +INPDE           ILSG+ + K+QD+
Sbjct:  295 VSRARFEELCADLFRNTLQPVEKALTDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDV 389          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  ++PVEK LRDAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  ++INPDE           IL+G+ + K QDL
Sbjct:  292 TSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDL 388          
BLAST of FC931643 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 293
            ++ITRARFEEL  DLFR  ++PVEK +RD K+DKS V ++VLVGGSTRIPK+Q+L+ DFFNGKE  K+INPDE           IL+G+ + K QDL
Sbjct:  295 TSITRARFEELCQDLFRSTLDPVEKVMRDGKLDKSQVAEIVLVGGSTRIPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDL 391          
The following BLAST results are available for this feature:
BLAST of FC931643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_DROME6.402e-2660.00Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME6.402e-2660.00Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME6.402e-2660.00Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_PARBA6.402e-2661.29Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP72_DROME6.402e-2660.00Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP74_PARLI8.361e-2656.70Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP72_YEAST8.361e-2659.79Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP72_DROSI8.361e-2660.00Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP71_YEAST8.361e-2659.79Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP71_PICAN8.361e-2658.76Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]

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Properties
Property NameValue
Genbank descriptionC34107D10EF PostHarvP1 Citrus clementina cDNA clone C34107D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931643 ID=FC931643; Name=FC931643; organism=Citrus clementina; type=EST; length=293bp
ACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTC
AGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGGA
CAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATTC
CCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTGC
AAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGC
TGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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