FC931644

Overview
NameFC931644
Unique NameFC931644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.112e-63
Identity = 122/223 (54.71%), Postives = 155/223 (69.51%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T +VMV GEI+T   V+  K+VR+   +IG+     G DA+ C VL  I++QS DIA GV   L  R       E IGAGDQG MFG+AT+ET E+MPL   +A +L  KL EVRKNGT  +LRPDGKTQVTVEY +      PVR+  V++STQHD  VT ++I  D+ EHVIK V+P ++LD++T +++NP+GRFVIGGPHGD GLTGRKII+DTY
Sbjct:   42 ETAVTTGMVMVMGEISTNCYVDIPKVVREVISDIGYTRAKYGFDAETCSVLTSIDEQSQDIAMGVDEALESRQGQKDDVEAIGAGDQGIMFGFATNETKEYMPLPINMAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEYEDNK----PVRIDAVVVSTQHDPEVTQEQIQKDIMEHVIKTVVPNEWLDDETKYYINPTGRFVIGGPHGDTGLTGRKIIVDTY 260          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.651e-62
Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+VFGE++TKA V+ +K+VRDT ++IG+V    G D DNC VLV +++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+ +L  K+  +RK+GT  WLRPD K QVTVEY  +N    P R+ TV++STQHD  V  D I   + + VIK V+P   LD++T + +NP+GRFVIGGP GDAGLTGRK+I+DTY
Sbjct:   44 ETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEYDEDNQ---PKRIDTVVLSTQHDPDVDLDTIRQTVIDQVIKAVLPADLLDDQTKYLVNPTGRFVIGGPQGDAGLTGRKVIVDTY 263          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.463e-62
Identity = 126/225 (56.00%), Postives = 153/225 (68.00%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  +IVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MP+   LA +L  +L EVRK    P+LRPDGKTQVT+EY +ENG   PVRV T+++S QH   +T ++I  D+KE VIKPV+P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   45 ETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIEY-DENGK--PVRVDTIVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTY 266          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.463e-62
Identity = 124/225 (55.11%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            E    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     P+RV T+++STQH   VT+ +I AD+ EHVIKP+IPE  LD+ T  ++NP+GRFVIGGP GD+GLTGRKII+DTY
Sbjct:   42 EVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTY 262          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.463e-62
Identity = 127/225 (56.44%), Postives = 151/225 (67.11%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            E    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     PVRV TV++STQH   VT+ +I AD+ EHVIKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY
Sbjct:   42 EVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDDK----PVRVDTVVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTY 262          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.522e-62
Identity = 127/225 (56.44%), Postives = 156/225 (69.33%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  K VRDT + IG+     G DA+ C VL  I++QS DIAQGV   L  R         + IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY ++N    PVR+ TV+ISTQH   VT ++I +DLKEHVI PV+P + +DE+T + +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   45 ETSVTTGLVLVSGEITTSTYVDIPKTVRDTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGTMTEEELDAIGAGDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVEYDDQNK---PVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTY 266          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.906e-62
Identity = 125/223 (56.05%), Postives = 158/223 (70.85%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEI+T A V+ +K+VR+T + IG+     G D DNC V+V +++QSPDIAQGV   L  R ++      IGAGDQG MFG+A D+TPE MPL   L+ +L  K+ E+RK+G   +LRPD K QVTVEY +EN    P RV TV+ISTQHDE VT + I  D+ E VIK VIP +YLD+KT + +NP+GRFVIGGP GD+GLTGRKII+DTY
Sbjct:   44 ETTVTTGLVLVVGEISTTAYVDIQKVVRETIKKIGYRDGQYGFDGDNCAVIVALDEQSPDIAQGVDDSLESREKDEDPLDKIGAGDQGLMFGFAVDQTPELMPLPIALSHRLMRKVAELRKSGQLAYLRPDAKAQVTVEY-DENEQ--PKRVDTVVISTQHDEDVTLETIQKDMLEQVIKTVIPAEYLDDKTKYFINPTGRFVIGGPQGDSGLTGRKIIVDTY 263          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.906e-62
Identity = 129/225 (57.33%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  KIVR T R IG+     G D D C VL  I++QSPDIA GV+  L  +         E IGAGDQG MFG+A DETPE MP+   LA +L  +L++VRKNGT  +LRPDGK+QVTVEY  +     PVRV TVLISTQH   V  D I  D+ EHVIKPVIP + LD KT + +NP+GRFVIGGP GD+GLTGRKII+DTY
Sbjct:   43 ETAVTTGLVLVTGEITTNCYVDIPKIVRSTIREIGYDRAKYGFDCDTCAVLTSIDEQSPDIAMGVNKALEAKTGEMSDEEIEAIGAGDQGMMFGFACDETPELMPMPISLAHKLAMRLSQVRKNGTLNYLRPDGKSQVTVEYDGDK----PVRVDTVLISTQHGPEVDYDTIKRDVIEHVIKPVIPAELLDSKTKYLVNPTGRFVIGGPQGDSGLTGRKIIVDTY 263          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.714e-62
Identity = 128/225 (56.89%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEI+T A V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +         E++GAGDQG MFG+A +ETPE MPL   LA +L  +LTEVRK G   +LRPDGKTQVTVEY         VRVHTVLIS QH ETV+ND+I  DL  HVIK VIP + LDE+T  ++NP+GRFVIGGP GD GLTGRKIIIDTY
Sbjct:   43 ETTVTTGLVLVAGEISTSAYVDIPKLVRETVREIGYTRAKYGFDCDTCAVITSIDEQSGDIAMGVDEGLESKTGEEIEEEIEKVGAGDQGIMFGFACNETPELMPLPISLAHKLSRRLTEVRKTGLVDYLRPDGKTQVTVEYEGSKA----VRVHTVLISAQHCETVSNDKIREDLINHVIKEVIPAELLDEETKIYINPTGRFVIGGPQGDTGLTGRKIIIDTY 263          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.007e-61
Identity = 127/225 (56.44%), Postives = 156/225 (69.33%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+   +VR T + IG+     G DA+ C VL  I++QS DIAQGV   L  R         E IGAGDQG MFG+AT+ET E MPL   L+ +L  +LTEVRKNGT  +LRPDGKTQVT+EY +EN    PVRV T+++STQH   VT ++I ADLKEHVI+ V+P   +DE+T + +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   47 ETSVTTGLVLVAGEITTNTYVDIPSVVRQTIKGIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGQMTDAEIEAIGAGDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIEY-DENDT--PVRVDTIVLSTQHAPEVTLEQIQADLKEHVIEAVVPSALIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTY 268          
The following BLAST results are available for this feature:
BLAST of FC931644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLONN9.112e-6354.71S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_LACPL2.651e-6254.71S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_GEOKA3.463e-6256.00S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_CALS83.463e-6255.11S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_ANATD3.463e-6256.44S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_BACP24.522e-6256.44S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_LACSS5.906e-6256.05S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_CLOTH5.906e-6257.33S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_CLOD67.714e-6256.89S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_BACSK1.007e-6156.44S-adenosylmethionine synthetase OS=Bacillus clausi... [more]

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Properties
Property NameValue
Genbank descriptionC34107D11EF PostHarvP1 Citrus clementina cDNA clone C34107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931644 ID=FC931644; Name=FC931644; organism=Citrus clementina; type=EST; length=688bp
GTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACA
ACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAA
CATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGG
TTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCAT
GGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCA
TATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTC
ATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAAT
GGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGA
GTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTT
TGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCT
GATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTGA
TGAGAAGACTATCTTCCATCTTAACCCATCCGGTCGTTTTGTGATTGGTG
GGCCTCATGGTGACGCTGGTTTGACCGGCCGCAAGATCATTATCGATACT
TATGGTGGTTGGGGAGCTCACGGTGGTGGTGCATTCTC
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