FC931644

Overview
NameFC931644
Unique NameFC931644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.828e-61
Identity = 130/225 (57.78%), Postives = 155/225 (68.89%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   45 ETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTY 266          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.828e-61
Identity = 130/225 (57.78%), Postives = 155/225 (68.89%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   45 ETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTY 266          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.828e-61
Identity = 130/225 (57.78%), Postives = 155/225 (68.89%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   45 ETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTY 266          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BACC1 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 10987) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.828e-61
Identity = 130/225 (57.78%), Postives = 155/225 (68.89%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   45 ETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTY 266          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.000e-61
Identity = 119/223 (53.36%), Postives = 156/223 (69.96%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   +  ++I  D+KEHVIK ++P + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY
Sbjct:   42 ETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTY 260          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.530e-61
Identity = 124/225 (55.11%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE--------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T +VMV GEITT   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +  E        IGAGDQG MFG+A DETPE MP+  +LA +L  KL+EVRKNG   +LRPDGK+QVTVEY  +     PVRV TV+ISTQH   V++D I  D+ EHVI PVIP + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY
Sbjct:   43 ETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTY 263          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.530e-61
Identity = 119/223 (53.36%), Postives = 154/223 (69.06%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCT T LVMV GEI+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ ++I  D+KE+VI  V+P + LD +T + +NP+GRFV+GGP GD+GLTGRKII+DTY
Sbjct:   42 ETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLEKIEKDIKEYVINAVVPTELLDSETRYFINPTGRFVVGGPQGDSGLTGRKIIVDTY 260          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.529e-61
Identity = 120/223 (53.81%), Postives = 156/223 (69.96%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY
Sbjct:   42 ETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAIGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTY 260          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.455e-60
Identity = 123/225 (54.67%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+V GEITT+  V+  K+VR     IG+     G DAD C V+  I++QSPDIA GV        G LS    E IGAGDQG MFG+A DET E MP+  +LA +L  +L EVRKNGT  +LRPDGKTQVTVEY ++     PVRV +V++S QH   + +D I  D+ EHVIKP+IPE  +D+KT   +NP+GRFVIGGP GD+GLTGRKII+DTY
Sbjct:   42 ETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDIIEHVIKPIIPENMIDDKTKIFVNPTGRFVIGGPQGDSGLTGRKIIVDTY 262          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_LACF3 (S-adenosylmethionine synthetase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.455e-60
Identity = 119/223 (53.36%), Postives = 158/223 (70.85%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T L +VFGEI+T A V+ + +VR+T + IG+     G D DNC V+V +++QS DIAQGV   L  R       ++IGAGDQG MFG+ATDETPE+MPL  +L+ +L  ++  +RK+    +LRPD K +VTVEY  +     PVRV TV++STQHD  V+ ++I AD+KE VIK VIP +YLD++T + +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   44 ETSVTTGLALVFGEISTSAYVDIQHVVRETIKEIGYTDGKYGFDGDNCAVIVALDEQSKDIAQGVDDSLEIREGQVDPLDQIGAGDQGLMFGFATDETPEYMPLPLILSHKLMRRIAILRKDKVIKYLRPDAKAEVTVEYDADGK---PVRVDTVVLSTQHDPDVSLEQIQADVKEQVIKAVIPAEYLDDQTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTY 263          
The following BLAST results are available for this feature:
BLAST of FC931644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACCR3.828e-6157.78S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC43.828e-6157.78S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC23.828e-6157.78S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC13.828e-6157.78S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_CLOBJ5.000e-6153.36S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOCE6.530e-6155.11S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_CLOBB6.530e-6153.36S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBK8.529e-6153.81S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_THEP31.455e-6054.67S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_LACF31.455e-6053.36S-adenosylmethionine synthetase OS=Lactobacillus f... [more]

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Properties
Property NameValue
Genbank descriptionC34107D11EF PostHarvP1 Citrus clementina cDNA clone C34107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931644 ID=FC931644; Name=FC931644; organism=Citrus clementina; type=EST; length=688bp
GTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACA
ACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAA
CATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGG
TTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCAT
GGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCA
TATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTC
ATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAAT
GGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGA
GTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTT
TGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCT
GATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTGA
TGAGAAGACTATCTTCCATCTTAACCCATCCGGTCGTTTTGTGATTGGTG
GGCCTCATGGTGACGCTGGTTTGACCGGCCGCAAGATCATTATCGATACT
TATGGTGGTTGGGGAGCTCACGGTGGTGGTGCATTCTC
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